Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1791 |
Symbol | |
ID | 5708374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 2063568 |
End bp | 2064329 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641271293 |
Product | ABC transporter related |
Protein accession | YP_001536668 |
Protein GI | 159037415 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000550439 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCCGGGC AAGGTCTCCT GTCGGTCCAC GGGCTGACCC GGGACTTCCG GGGCTTCCGG GCCGTCGACG ACGTCGACCT CCAGATCACG GCGGGCAGCG TGCACGCGTT GGTCGGCCCG AACGGCGCCG GCAAGACGAC ACTGTTCAAC CTGCTCACCG GCTTCCTGTC GCCCAGCGCC GGCCGGATCG AGCTGGCGGG GCGGGACATC ACCGGCCTGC CCGCGGAGCA GGTCGCCCGC CGCGGCGTCG CCCGCTCCTT CCAGATCACC AGCCTCTTCC CGCAACTGTC CACGCGGGAG CACGTCGAGT TGGCGCTCCA GAGTTCGAGC GGCCTGGGCT GGCGCTTCTG GCGGTCGGCG ACGCTGATGC GGCGCTACTC CGACCGGGCC GGTGAGCTGC TGGACATGGT CGGTCTGGCC GATCTGGCGG CGGTTCCCGC CGAAGCGCTC GCCTACGGCC GCAAGCGGGC CCTGGAACTG GCGATCGCCC TCGCCCTGGA GCCGAAGGTG CTGCTGCTGG ACGAGCCGAC CGCGGGCATG GGCCTGGAGG ACGTCGACCG CACGGTCGAC CTGATCGCCC GGGTGCGGCA GGGCCGCACC GTGGTGCTGG TCGAACACAA CATGAGCGTC GTCGGGCGAC TCGCCGACAC CGTCACCGTG CTCCAGGCCG GCCGGGTCCT TGTCGAGGGG TCCTACGAGC AGGTCCGCGC CGACGAACGG GTGATCACCG CCTACCTGGG AGCAGCCGAT GCTGCGCATT GA
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Protein sequence | MAGQGLLSVH GLTRDFRGFR AVDDVDLQIT AGSVHALVGP NGAGKTTLFN LLTGFLSPSA GRIELAGRDI TGLPAEQVAR RGVARSFQIT SLFPQLSTRE HVELALQSSS GLGWRFWRSA TLMRRYSDRA GELLDMVGLA DLAAVPAEAL AYGRKRALEL AIALALEPKV LLLDEPTAGM GLEDVDRTVD LIARVRQGRT VVLVEHNMSV VGRLADTVTV LQAGRVLVEG SYEQVRADER VITAYLGAAD AAH
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