| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1780 |
|---|
| Symbol | |
|---|
| ID | 5706591 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 2051765 |
|---|
| End bp | 2052826 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641271283 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001536658 |
|---|
| Protein GI | 159037405 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1668] ABC-type Na+ efflux pump, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00299545 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAACACCC TCGCCGCCAC CCAGTTGGTC GCGGCCCGTG AGATCCGGGC CAAGCTGCGC
GACCGCACCT TTCTCCTCAG CACGCTGATC TTCCTGCTCA TCGCCGCCGC CGCGACGACT
CTGCCGTCGC TGCTGTCCGG CGGCCCATCC ACGGTGGCCG CGACGCCGGT GGTCTCGGCC
GAGCTGCGCG CCGCCGGACT CGAGGTCCGC GAGGTGCCCG ACGACGCCGC CGCCGAACGG
GCGGTTCGGG ACGGCGACAC CGACGCGGCG GTGGTCGCCG GGCCAACGGT CCTCGCGCGG
GAGAAGGCTC CCTCCGACGT CGTGGCGGCG CTCAGCGTTG AACCGCCGGT ACGGTTGCTG
AACCCCGCCC CGGCGGAACC ACCGGGGGCC TTCCTGGTGC CGTTCGTCTT CGCGTTCGCC
TTCCTCCTCA CGTCCCAGAC CTTCGGCGTC CAGATCGCGC AGAGCATCAT CGAGGAAAAA
CAGACCCGGA TCGTCGAGAT CCTGGTGGCC GCCGTGTCGG TACGAGCCCT GCTCGCCGGC
AAGATGATCG CCGGCACCGT GCTGGCCCTG GGCCAGATAG CGCTGGTGGC GCTCGTCGCG
GTCGTGGGGT TGCGACTCTT CGGTGACAGC GAGCTGCTGA ACCTGCTCGC GCCGGCGATC
GGCTGGTTCC TGCCGTACTT CCTGCTCGGC TTCGTCCTGA TCGCCGCGCT GTGGGCCGCG
GCGGGAGCCC TGGTCAGCCG GCTGGAAGAC ATCGGCACGG TGGCCATGCC GGTCCAGTTG
GTGGTGATGC TCCCGTTCTT CGGGGTGATC TTCCTCAGCG ACAACGCGTT CGCCATGCAG
GTGCTGTCCT ACGTGCCGTT CTCGGCGCCC ACCGCGATGC CGCTGCGGCT GTTCACCGGG
GACGCCGCTG GCTGGGAACC TCCACTGTCA CTGGCCCTGC TGCTGGTCAC CGCGCTCGCC
GTCCTGGCCG CCGGGGCCCG GGTGTACGAG GGGTCGCTGC TGCGGACCAA CGGCAACACC
TCGCTGCGGA CGGCCTGGCG GGAACGAGAG ACAGTGGACT GA
|
|---|
| Protein sequence | MNTLAATQLV AAREIRAKLR DRTFLLSTLI FLLIAAAATT LPSLLSGGPS TVAATPVVSA
ELRAAGLEVR EVPDDAAAER AVRDGDTDAA VVAGPTVLAR EKAPSDVVAA LSVEPPVRLL
NPAPAEPPGA FLVPFVFAFA FLLTSQTFGV QIAQSIIEEK QTRIVEILVA AVSVRALLAG
KMIAGTVLAL GQIALVALVA VVGLRLFGDS ELLNLLAPAI GWFLPYFLLG FVLIAALWAA
AGALVSRLED IGTVAMPVQL VVMLPFFGVI FLSDNAFAMQ VLSYVPFSAP TAMPLRLFTG
DAAGWEPPLS LALLLVTALA VLAAGARVYE GSLLRTNGNT SLRTAWRERE TVD
|
|---|
| |