Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1770 |
Symbol | thrS |
ID | 5704512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 2040267 |
End bp | 2042282 |
Gene Length | 2016 bp |
Protein Length | 671 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641271273 |
Product | threonyl-tRNA synthetase |
Protein accession | YP_001536648 |
Protein GI | 159037395 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0441] Threonyl-tRNA synthetase |
TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0365193 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000990893 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGTCCGCAC CCCGTAACCC CGTCGTGGCC GACCCCGTCG TCGTGGCCGC CGGGACGACG GCGGCCGACG CGGTCGCGGC GGCCGGGCTT CCGGTGGCCG GTCGGGCCGC GGTCGTGGTG GTGCGGGATC CGCAGGGCCA GCTTCGCGAC CTGGACTGGA CCCCGGTGGA GGAGACCGTG GTCGAGCCGG TCGGCATCGA CACCCCGGAC GGGCTGGCCG TGCTGCGGCA CTCCACCGCC CACGTGCTCG CCCAGGCCGT GCAGGACCTC TTTCCCGAGG CGAAGCTGGG CATCGGCCCA CCGATCGAGA ATGGTTTCTA CTACGACTTC GCGGTCGACC GGCCGTTCCA GCCCGAGGAC CTGACAAAGC TGGAAAAGCG GATGCAGGAG ATCATCAAAT CCGGCCAGCG GTTCCGTCGC CGCCGCTTCC GCAACCTGGA CGAGGCGCGC GGTGAACTCG CGGCCGAGCC GTTCAAGCTG GAGCTGATCG AACTCAAGGG TGACGGGCTG GACTCCTCCC AGGTGATGGA GGTGGGTGGC GGCGAACTGA CCAGCTACGA CAACCTTGCC GCCGATGCGG ACAAGGTCTG CTGGTCGGAC CTGTGCCGCG GTCCCCACCT GCCGAACACC CGACTCATCG GGGCCTTCAA ACTGATGCGG TCGGCCGCCG CGTACTGGCG TGGTTCGGAG AAGAACCCAC AGCTCCAGCG GGTGTACGGC ACCGCCTGGC CGACCCGGGA CGAGTTGAAG GCGTACCTGC GGCTCCTGGA GGAGGCCGCC CGGCGCGACC ACCGCAAGCT CGGTACCGAC CTCGACCTGT TCAGCTTCCC GGAGGAGATC GGCTCAGGCC TGCCGGTGTT CCACCCCAAG GGCGGCGTGC TCAAGCGGAC GATGGAGGAC TACGTCCGTG CCCGGCACAT CGAGGAGGGC TTCGACTACG TCGGCACCCC GCACATCTCG AAGGAAGGGC TCTTCCACAC CTCGGGCCAC CTGCCGTACT ACGCCGACGG GATGTTCCCG CCCATGCACC TGGAGGGGGC GGACTACTAC CTCAAGGCGA TGAACTGCCC GATGCACAAC CTGATCTACC GGTCCCGCGG GCGGTCCTAC CGGGAACTGC CGATGCGGCT GTTCGAGTTC GGCTCGGTCT ACCGTGACGA GAAGTCCGGC GTCATCCATG GGCTGACCCG GGTGCGCGGT TTCACCCAGG ACGACTCGCA CTCCTACTGC ACCAAGGAGC AGGCGCCCGC CGAGATCAAG CATCTGCTGG CCTTCGTGCT CGGGCTCCTG CAGGACTTCG GGATCACCGA CTTCGTCCTC GAGTTGTCCA CCCGCGACGA CGCCAACCCG GACAAGTTCG TCGGCTCCGC CGAGGACTGG GCAACGGCGA CGGCGGTGCT GGAGCAGTGC GCCAGGGACA CCGGGCTCGA CCTGGTGCCG GATCCGGGAG GCGCGGCCTT CTACGGTCCG AAGATCTCGG TGCAGGCCAA GGACGCCATC GGCCGGACCT GGCAGATGTC GACCATCCAG TATGACTTCA ACCAGCCGGC GGGCTTCGGG CTGGAGTACC AGGCCGCCGA TGGCAGCCGT CAGCGGCCGG TCATGATCCA CTGTGCGAAG TTCGGCTCGA TCGAGCGGTT CATCGGCGTG CTCACCGAGC ACTACGCCGG GGCGTTCCCG GCGTGGCTGG CGCCGGTGCA GGTGGTCGGC ATCCCGATCC GCGAGGACCA CACCGAGTAC CTGGACGGGT TCGTCGCCGG GCTGCGCGCT GCGGGGATCC GGGCCCAGGT GGACGCCGGT GACGACCGGA TGCAGAAGAA GATCCGCACC GCCCAGCAGC AGAAGATCCC GTTCATGGCG ATCGCGGGGG ACGACGACGT GGCGGCGGGC ACCGTGTCGT TCCGCTACCG GGACGGCTCG CAACGTAACG GGGTGCCGGT CGCCGAGGCG GTCAGCCACG TCCTCGACGT GGTCAACTCC CGCGCCAACC AGGGCCCCTC CGCCGCCCAG GAGTAA
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Protein sequence | MSAPRNPVVA DPVVVAAGTT AADAVAAAGL PVAGRAAVVV VRDPQGQLRD LDWTPVEETV VEPVGIDTPD GLAVLRHSTA HVLAQAVQDL FPEAKLGIGP PIENGFYYDF AVDRPFQPED LTKLEKRMQE IIKSGQRFRR RRFRNLDEAR GELAAEPFKL ELIELKGDGL DSSQVMEVGG GELTSYDNLA ADADKVCWSD LCRGPHLPNT RLIGAFKLMR SAAAYWRGSE KNPQLQRVYG TAWPTRDELK AYLRLLEEAA RRDHRKLGTD LDLFSFPEEI GSGLPVFHPK GGVLKRTMED YVRARHIEEG FDYVGTPHIS KEGLFHTSGH LPYYADGMFP PMHLEGADYY LKAMNCPMHN LIYRSRGRSY RELPMRLFEF GSVYRDEKSG VIHGLTRVRG FTQDDSHSYC TKEQAPAEIK HLLAFVLGLL QDFGITDFVL ELSTRDDANP DKFVGSAEDW ATATAVLEQC ARDTGLDLVP DPGGAAFYGP KISVQAKDAI GRTWQMSTIQ YDFNQPAGFG LEYQAADGSR QRPVMIHCAK FGSIERFIGV LTEHYAGAFP AWLAPVQVVG IPIREDHTEY LDGFVAGLRA AGIRAQVDAG DDRMQKKIRT AQQQKIPFMA IAGDDDVAAG TVSFRYRDGS QRNGVPVAEA VSHVLDVVNS RANQGPSAAQ E
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