Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1744 |
Symbol | |
ID | 5705377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 2015181 |
End bp | 2016785 |
Gene Length | 1605 bp |
Protein Length | 534 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641271247 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_001536622 |
Protein GI | 159037369 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0167987 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCCAG TCGGCGCGGC GTCCCCGGAC GCGATCGTTA TCGGAGCGGG GCACAACGGT CTGGTGGCCG CCAATCTGCT CGCCGACGCC GGCTGGGACG TGCTCGTGCT GGAGGCGACC GGAGCGCCGG GCGGGGCGGT CCGATCGGCC CAGGTGACCG CTCCCGGCTA CCTGAGCGAC CTCTACAGCT CCTTCTACCC CGTCGGTTAC GCCTCGCCGG TGCTGCGCGG GCTGGGGCTG GACCAGTACG GGGTGCGTTG GCGGCACGCC CCGGACGTGT TGGCGCACCT GCTGCCGGAC GGGCGGGCGG CGGTACTCAA CCGCGATCCG GCGACCACGG CCACCTCCCT GGAGGCGTTC GCGGCCGGTG ACGGAGAGCG GTGGCTGGCC GCGTACGGCG ACTGGTGCCA GGTGGCCGAC CCGGTGCTGG ACGCCATCAC CACGCCATTC CCGCCGGTGC GCAGCAGTCT CACCCTGGTG CGCCGGCTGC GGGTCGCCGG GGCGATGCGT CTGGCCCGCC AACTGGTGAT GCCGGTTCGT CGGCTCGGCG ACGAGCTCTT CCGTGGGGCG GGTGGTGCGG CCCTGCTCGC CGGCTGCGGG CTGCACACCG ACCTCGCCCC GGAGGAGGTC GGCTCCGGGG CTTTCGGGTG GCTGCTGGCG ATGCTTGGCC AGCAGGTTGG TTGGCCAGTG CCGGACGGCG GCGCCCAGCG GATCACCGAC GCGCTGGTGG CGCGGCTCGC CGACCGGGGC GGTCAGATTC GCTGCGGCGC GCGGGTGGAT CGGGTGCTGA CCGCCCGGGG CCGGGCGATG GGCGTCCGGA CCGAGGACGG TGCGCTGTGG CGGGCCCGCC GTGCGGTGCT CGCCGACGTG CCGGCACCCG CACTCTTCCT GGATCTTGTC GGGGCCGACG TGCTACCGCC CCGGCTGGTG GCGGACCTGG CCCACTTCCG GTGGGACGGC TCGACCCTGA AGGTCGACTG GGCGTTGTCC GCTCCGGTGC CGTGGACCAA CCGAGCGGTT GCCACGGCGG GCACCGTCCA CCTCGGCGCC GACCTCGACG GGCTGACCGA CTACGCGGCG ACGCTGGCCC GGGGGGAGGT TCCCCGCAGT CCGTTCCTGT TGGTCGGGCA GATGACCGTC GCCGACCCCA GCCACTCGCC GCCCGGCACC GAGTCGTTGT GGTCGTACAC CCACCTGCCG TTCCGGCGGT CGTGGCGGGC CGAGGAGGTC GCCGCGCACG TACAGCGGAT GGAACAGGTG CTGGAGGATG CCGCCCCGGG CTTCCGTGAC CTGGTGGTGG GCCGCCACGT GGCGGGACCG GCGGACCTGG AGGCGGGCGA TCCGAGCCTG GTCGGCGGGG CACTCGGCGG GGGCACCGCC GCCGCCTACC AACAGCTGTT CTTCCGCCCG GTCCCCGGCC TCGGTCGCGC CGACACACCC GTCGACCGGC TCTTTCTGGC CAGTGCGTCG GCGCATCCCG GCGGTGGTGT GCACGGCGCG TGCGGTGCCA ACGCCGCGCG GGCGGCGTTG GCCCGCGACG GTGCGCTGAC CGGCGGCCTG TACGCGGCGG CGATGGGTGC GGCGCACCGC GCGGTCTACC GCTGA
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Protein sequence | MAPVGAASPD AIVIGAGHNG LVAANLLADA GWDVLVLEAT GAPGGAVRSA QVTAPGYLSD LYSSFYPVGY ASPVLRGLGL DQYGVRWRHA PDVLAHLLPD GRAAVLNRDP ATTATSLEAF AAGDGERWLA AYGDWCQVAD PVLDAITTPF PPVRSSLTLV RRLRVAGAMR LARQLVMPVR RLGDELFRGA GGAALLAGCG LHTDLAPEEV GSGAFGWLLA MLGQQVGWPV PDGGAQRITD ALVARLADRG GQIRCGARVD RVLTARGRAM GVRTEDGALW RARRAVLADV PAPALFLDLV GADVLPPRLV ADLAHFRWDG STLKVDWALS APVPWTNRAV ATAGTVHLGA DLDGLTDYAA TLARGEVPRS PFLLVGQMTV ADPSHSPPGT ESLWSYTHLP FRRSWRAEEV AAHVQRMEQV LEDAAPGFRD LVVGRHVAGP ADLEAGDPSL VGGALGGGTA AAYQQLFFRP VPGLGRADTP VDRLFLASAS AHPGGGVHGA CGANAARAAL ARDGALTGGL YAAAMGAAHR AVYR
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