Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1729 |
Symbol | |
ID | 5703428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 2001583 |
End bp | 2002425 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641271232 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001536607 |
Protein GI | 159037354 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.095212 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0102473 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTGCGA GCCCGACCGT ACGCCGCCGC CGAATCGCCC GTGAACTACG TCAACTGCGT GAGCGCGCCA ACATGACCCT CGATGTCGCC GCCCGACAGT TGGACATGTC CAAAAGCAAC CTGTCCCGGA TCGAGAACGC CCAGATCGGC ATCAAGCCGC GCGACGTCCG CGCCGCCCTG GCCCTCTACC AGGTGACCGG CGCCGACGCC GAGGCGCTGA TCGACATCGC CCGCGGGGCC CAGCAGCGCG GGTGGTGGCA GAACTACAGC GACGTACTGC CCGAGTGGTT CGAGTTCTAC GTCGGCCTGG AGGCGGAGGC CGCCGCGCTG CGCACGTACG AGGGCGAAGC CGTGCCCGGA CTACTGCAGA CCGAGGCGTA CGCGCGAGAG GTCTTCCGGC GCACGGCCGG CGAGGAGGGG CTCGAGCGGA AGGTCGCCGC GCGACTGCGC CGTCAGGAGG TGTTGCACCA CGACGACCCG GTGGAACTGT CGGTCGTTCT CAACGAGGCG GTGCTCTGCC GACCGGTCGG GGGGAACCAG GTGATGGCCG ACCAGCTGGC GCATATCGCG AAGGTCGCCC AGTTACCGAA CGTAACGGTG CAGGTACTAC CCTTCTCGGC CGGCGGCCAT CCCGCCATGA GCGCGCCCTA CGTGATCCTC GCTTTCGCCG ACACGGCCGA CGCGGCCGTG GTTTACCTGG AAAATCTCAC GACTGGCCTA GCGCTGGAGG GGGTTGGAAA CGTTACCGGG TATAGCCTGG TGCACGAGGA GTTGCGCCGT CTGGCGCTCG GTCCAGAGGC GTCCCAGGCA CGCCTTATGG CAGCTTCTCG TAACTTTGCG TGA
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Protein sequence | MTASPTVRRR RIARELRQLR ERANMTLDVA ARQLDMSKSN LSRIENAQIG IKPRDVRAAL ALYQVTGADA EALIDIARGA QQRGWWQNYS DVLPEWFEFY VGLEAEAAAL RTYEGEAVPG LLQTEAYARE VFRRTAGEEG LERKVAARLR RQEVLHHDDP VELSVVLNEA VLCRPVGGNQ VMADQLAHIA KVAQLPNVTV QVLPFSAGGH PAMSAPYVIL AFADTADAAV VYLENLTTGL ALEGVGNVTG YSLVHEELRR LALGPEASQA RLMAASRNFA
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