| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1716 |
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| Symbol | |
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| ID | 5703270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 1986953 |
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| End bp | 1989463 |
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| Gene Length | 2511 bp |
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| Protein Length | 836 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641271219 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001536594 |
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| Protein GI | 159037341 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4581] Superfamily II RNA helicase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.64793 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00121267 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACACTTA CCGCCGCGCT GCCGGCCAGC GCCGACCCCG ACACCCTGTA CGACGCGTTC
GCCGGTTGGG CGTCCGCCCG CGGCCTCGAT CTCTACCCGC ACCAGGAGGA GGCGGTCATC
GAGATCGTTT CCGGTGCGAA CGTGATCATG AATACGCCGA CCGGATCCGG TAAGAGCCTG
GTCGCGATCG CAGCGCACTT CGCCGCACTG GCCGACGACC GGACGACCTT CTACACGGCC
CCGATCAAGG CGCTGGTGTC GGAGAAGTTC TTCGCGCTCT GCGAGGTGTT CGGGGCCGAC
AACGTCGGCA TGCTCACCGG TGACGCCAGC GTGAACCCGG ACGCGCCGAT CATCTGCTGT
ACCGCCGAGA TCCTGGCCAA CCTCGCGCTG CGGGAGGGTG CCCGCGCCGA TGTCGGGCAG
GTGATCATGG ACGAGTTCCA CTTCTACAGC GAGCCGGACC GGGGCTGGGC GTGGCAGGTA
CCACTGATCG AGCTGCCGCA GGCACAGTTC GTCCTGATGT CCGCCACGCT CGGGGACACC
ACCCGGTTCG TCGCCGACCT CACCCGGCGC ACCGGGCGCG CGACCGCCGT CGTCCGCACC
GCCGAACGAC CGGTCCCGCT TCTCTTCTCG TACGCGATGA CGCCGCTACA CGAGACCCTC
GAGGAGTTGC TGGAGACCCG CGAGGCCCCG GTGTACGTCG TGCACTTCAC GCAGGCTGCC
GCCCTGGAAC GCGCCCAGGC GTTGATGAGC GTCAACGTGT GTACCCGGGC CGAGAAGGAC
ATGATCGCCG CAGCGATCGG GAACTTCCGT TTTACCTCCG GATTCGGACG GACGCTGTCG
CGTCTGGTGC GCCACGGCAT CGGTGTGCAC CACGCCGGGA TGCTGCCCAA GTACCGCCGC
CTGGTGGAGA CGTTGGCCCA GGCCGGGCTT CTCAAGGTCA TCTGCGGCAC GGACACCCTC
GGGGTTGGCA TCAACGTACC GATCCGCACC GTGCTCTTCA CCGGGCTGTC GAAGTACGAC
GGAACCCGGA CCCGGCTGCT CAAGGCCCGC GAGTTCCACC AGATCGCCGG ACGCGCCGGG
CGGGCCGGCT TCGACACCCT CGGCCGGGTC GTGGTGCAGG CCCCGGAGCA CGTCATCGAG
AACGAGAAGG CCCTGGCGAA GGCTGGGGAC GACCCGAAGA AGCGCCGTAA GGTCGTCCGG
AAGAAGCCGC CGGAGGGGTC GATCGGCTGG GGCAAGCCCA CCTTCGAGCG CCTGGTCGAG
GCCGAGCCGG AGCCGCTGGC CTCCAGCTTC CAGGTCAGCC ACTCGATGCT GCTCAACGTC
ATCGGCCGTC CGGGCGACGC GTTCGCGGCG ATGCGGCACC TGCTCACCGA CAACCACGAA
GACCGCACCG CCCAGCGACG ACACATCCGC CGGGCCATCG CCATCTACCG GGCGCTGCGG
GCCGGCGGCG TCGTCGAAGA GCTACCCGAG CCGGACGAGT CCGGCCGGCG GGCGCGACTC
ACCGTCGACC TCCAGCTCGA CTTCGCCCTC AACCAGCCGT TGTCGCCTCT CGCCCTGGCG
ACAATCGAGC TCCTCGACCG CGAGTCCCCG GCCTACGCCC TGGATGTGCT CAGCGTGATC
GAGTCGATCC TCGACGACCC GCGGCAGGTG CTGTCCGCGC AGCAGTTCAA GGCCCGCGGT
GAGGCGGTCG CCGCGATGAA GGCCGAGGGC ATCGAGTACG AAGCACGCCT GGAACTGCTC
GACGAGGTCA CCTGGCCCAG GCCCCTCGCC GAGCTGCTGG AGAACGCGTA CGAGATGTAT
CGCCAGGGGC ACCCCTGGGT GGCCGACCAC CAACTCTCCC CCAAGTCCGT CGTCCGGGAC
ATGTACGAGC GGGCGATGAC CTTCGGCGAA TTCGTCCAGC TCTACGGGTT GACCCGGTCG
GAGGGCCTGG TCCTGCGGTA CCTCGCCGAC GCGTACAAGA CGCTCCGGCA CACCGTCCCC
GAGGACGCCA AGACCGAGGA GTTGGTCGAC CTCATCGAGT GGCTGGGCGA GTTGGTCCGC
CAGGTCGACT CCAGCCTCAT CGACGAGTGG GAGCGGCTGC GCAACCCGTC CGACGTCGAC
GAGGTCGCCG TCGCCCTGGA CGACCAGCCC ACTGCGGTGA CCAGCAACAC CCGGGCCTTC
CGGGTGCTGG TGCGCAACGC ACTGTTCCGC CGGGTGGAGT TGGCCGCCCT GCGCCGCTGG
GACGAGCTGG GCGAGCTGGA CGGCGCCGCC GGCTGGGACG CCGCCGCCTG GGAAGACGCC
CTGGAACCGT ACTTCGAGGA GTACCCGGAG ATCGGTATCG GGCCGAACGC CCGCGGGCCG
GCGCTGCTGC TGATCGAGCA GGGCAACGCG ACCTGGACCG TACGCCAGAT CCTGGACGAC
CCCGAAGGTG ACCACGACTG GGGAGTCAGC GCCGAGGTGG ACCTCGCGGC CTCCGACGAG
GCGGGCGCGG CGGTCATCCG GATCACCGAG GTCGGGCAGC TCGGCGCTTA G
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| Protein sequence | MTLTAALPAS ADPDTLYDAF AGWASARGLD LYPHQEEAVI EIVSGANVIM NTPTGSGKSL
VAIAAHFAAL ADDRTTFYTA PIKALVSEKF FALCEVFGAD NVGMLTGDAS VNPDAPIICC
TAEILANLAL REGARADVGQ VIMDEFHFYS EPDRGWAWQV PLIELPQAQF VLMSATLGDT
TRFVADLTRR TGRATAVVRT AERPVPLLFS YAMTPLHETL EELLETREAP VYVVHFTQAA
ALERAQALMS VNVCTRAEKD MIAAAIGNFR FTSGFGRTLS RLVRHGIGVH HAGMLPKYRR
LVETLAQAGL LKVICGTDTL GVGINVPIRT VLFTGLSKYD GTRTRLLKAR EFHQIAGRAG
RAGFDTLGRV VVQAPEHVIE NEKALAKAGD DPKKRRKVVR KKPPEGSIGW GKPTFERLVE
AEPEPLASSF QVSHSMLLNV IGRPGDAFAA MRHLLTDNHE DRTAQRRHIR RAIAIYRALR
AGGVVEELPE PDESGRRARL TVDLQLDFAL NQPLSPLALA TIELLDRESP AYALDVLSVI
ESILDDPRQV LSAQQFKARG EAVAAMKAEG IEYEARLELL DEVTWPRPLA ELLENAYEMY
RQGHPWVADH QLSPKSVVRD MYERAMTFGE FVQLYGLTRS EGLVLRYLAD AYKTLRHTVP
EDAKTEELVD LIEWLGELVR QVDSSLIDEW ERLRNPSDVD EVAVALDDQP TAVTSNTRAF
RVLVRNALFR RVELAALRRW DELGELDGAA GWDAAAWEDA LEPYFEEYPE IGIGPNARGP
ALLLIEQGNA TWTVRQILDD PEGDHDWGVS AEVDLAASDE AGAAVIRITE VGQLGA
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