Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1710 |
Symbol | |
ID | 5703264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 1980807 |
End bp | 1981502 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641271213 |
Product | ThiJ/PfpI domain-containing protein |
Protein accession | YP_001536588 |
Protein GI | 159037335 |
COG category | [R] General function prediction only |
COG ID | [COG0693] Putative intracellular protease/amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00605014 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCAAAGA TCCTGTTCGT GGTGTCCGGC GTCGACCACT GGGAGCTCGC CGACGGCACC ATGCATCCCA CCGGTTACTG GGCTGAGGAA GTCGTGGTCC CGCACGAGAC GTTCACCAGC GCGGGTCACG ACGTCGTCAT CGCCACCCCG GGCGGAGCCG TACCACAGGT GGACCAGCGG AGCCTGCTGC CCGAATTCAC CGGTGGGCAG GAGGGGGCCG CTCGCATGGT CAAGGCTGTC GAGGGCATCG AAGGTCTACA TAAGCCGATT CGCCTGGAGG ACGTCAACCT CGACGAGTAC CAGGCGGTCT ACTACCCGGG GGGTCACGGG CCGATGGAGG ACCTGGCGGT CGACCAGAAC TCCGGTCAGC TGCTGGTGAC CGCCATGCAA GGGGCCAAGC CGCTCGGCAT CGTCTGCCAC GGGCCCGCGG CGATGCTCGC CGCGGTGCGG GCCGACGGCG CCAACGTCTT CGCCGGGCGT CGAGTGACCG GCTTCACCAA CGAGGAGGAG GCCCAGGCCG GGCTGGCCGA CAAGGCCAAG TGGCTGCTCC AGGACCGCCT GGTCGAAATC GGAACCCAGT TCCAGGAGGG TGAGGCGTGG GCGCCGCACG TGATCGTCGA CGGCAACCTG GTCACCGGGC AGAACCCGGC GTCCTCCGCG CAGGTCGCCA CAGAGCTGCT GCGTAAACTG GCCTGA
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Protein sequence | MSKILFVVSG VDHWELADGT MHPTGYWAEE VVVPHETFTS AGHDVVIATP GGAVPQVDQR SLLPEFTGGQ EGAARMVKAV EGIEGLHKPI RLEDVNLDEY QAVYYPGGHG PMEDLAVDQN SGQLLVTAMQ GAKPLGIVCH GPAAMLAAVR ADGANVFAGR RVTGFTNEEE AQAGLADKAK WLLQDRLVEI GTQFQEGEAW APHVIVDGNL VTGQNPASSA QVATELLRKL A
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