| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1709 |
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| Symbol | |
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| ID | 5703263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 1976600 |
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| End bp | 1980619 |
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| Gene Length | 4020 bp |
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| Protein Length | 1339 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641271212 |
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| Product | ATP-dependent helicase HrpA |
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| Protein accession | YP_001536587 |
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| Protein GI | 159037334 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00220451 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGAACG AAGCCGCCTC CACCCCGTCC AACGCCACCC GCGAGCTGCA CCGTCGGCTA
CGCCCGTTGA TGCTCCGTGA CCAGCACCGC CTCCGACGAC GGCTGGACAG TGCACGGCGG
ATACCCGACC CGCAACGCCG GGAAACAGCC CTGGCCGAAA TCACCACCGA CGTGGTCCGG
GCCGAGGCAC GGCTGGCGCG GCGGCAGGCA GCCGTGCCGA CGATCACCTA CCCGACCCTG
CTGCCGGTCA GCGACCGCCG GGAGGACATC GCCGCGGCGA TCCGCGAGCA CCAGGTGGTG
ATCGTCGCCG GCGAGACCGG CTCCGGCAAG ACCACCCAGC TACCCAAGAT CTGCCTTGAA
CAGGGCCGCG GCGTCCACGG GCTGATCGGG CACACCCAGC CGCGTCGGCT CGCCGCACGG
ACGGTCGCCG ACCGGATCGC CGAGGAACTC GGCACCGAAC TGGGCGACGT GGTCGGCTAC
CAGGTGCGCT TCGCCGACCA GGTCAGTGAC CGAAGCCTGG TCAAGCTGAT GACCGACGGC
ATCCTGCTCG CGGAGTTGCA GACCGACCGG ATGCTGCGGC AGTACGACAC GATCATCGTC
GACGAGGCAC ACGAACGCAG CCTGAACATC GACTTCATCC TCGGTTACCT GCGGCAGCTC
CTCCCCCGCC GGCCCGACCT CAAGGTCGTC ATCACCTCGG CCACCATCGA AACCGATCGG
TTCGCGCGGC ACTTCGCGGA CGCCGAAGGC ACACCGGCAC CAGTTGTCGA GGTCTCCGGG
CGGACCTACC CGGTCGAGGT ACGGTACCGG CCGCTGGTCG AGGCGGGCGA GGACGAGGAC
GACACCGACG AGGAGCATGT CCGCGACCAG ATCCAGGCCA TCGGGGACGC GGTGCAGGAA
CTGGCTGCCG AAGGGCCCGG CGACATCCTG GTCTTCCTGT CCGGCGAACG GGAGATCCGC
GACACCGCGG ACGCGCTCGG CAAGCTGGTG CCGCACCGGC CGGCGCTGCG GAACACCGAG
ATCCTGCCGC TGTACGCCCG CCTGAGCACC GCCGAGCAAC ACCGCGTCTT CGCCCCACAC
AGCGGCCGAC GGATCGTGCT GGCCACCAAC GTCGCGGAGA CGTCGCTCAC GGTGCCGGGC
ATCCGATACG TGGTGGACCC CGGCGCGGCA CGCATCTCCC GCTACTCGAA CCGACTCAAG
GTGCAGCGGC TGCCCATCGA GCCGATCTCC CAGGCATCAG CCAACCAGCG CACGGGACGG
TGCGGGCGCA CCTCGGACGG CATCTGCATC CGCCTCTACG ACGAGCCGGA CTTCCAGTCC
CGATCCGAGT TCACCGACCC GGAGATCCTG CGCACCAACC TCGCGTCGGT CATTCTCCAG
ATGACCGCGA TCGGGCTCGG CGACGTCGCC GCGTTCCCGT TCATCGACCC ACCGGACCGG
CGCAACATCA CCGACGGCGT CAACCTGCTG CACGAACTGG GCGCGCTGAA CCCGACCGAG
CCCGATCCGG CGAAGCGACT CACCCCGCTC GGCCGGCGAC TCGCCCAACT GCCGGTCGAT
CCACGGCTGG CCCGAATGGT GCTCGAGGGC GAGCGCAACG GCTGCGCCAC CGAGGTGGTC
GTGATCGCCG CGGCCCTGTC GATCCAGGAC CCGCGGGAAC GGCCGGTCGA CAAGCAGGCC
CAGGCCGACC AGGCACATGC CCGGTTCGCC GACCAGGAGT CGGACTTCGT GGCGTACCTC
AACCTGTGGC GATACCTGCG TGAGCAGCAG CGAGCCCGGT CGTCCAGCGG GTTCCGACGG
ATGTGCCGGT CGGAGTATCT GAACTACCTG CGGGTGCGCG AGTGGCAGGA CATCGTGAGC
CAGCTCCGGC AGGCGCTGCG TACCCCGGAG CGGAACCGAC GGCGGGGCGG CCCGACGGCC
GACGGCAACG GGCGACGTGG TGGTGGGGCG GACCTGCCGG AGGAGGTCGA CACCACGAAG
GTGCACCAGT CCCTGCTGGC CGGCCTGCTC TCCCATGTCG GGCTGAAGGA CACGCAGCGG
AACGAGTATC TGGGTGCCCG CGGGGCCAGG TTCGCCCTGT TCCCCGGCTC CGCCCTGGCG
AAGAAGCCGC CGCGCTGGGT GATGGCCGCC GAGCTCGTGG AGACCACCCG GCTGTGGGGC
CGGGTGAACG GTCGGATCGA ACCGGAATGG GTCGAGCCGA TCGCCCAGCA CCTGGTGAAA
CGCAGCTACA GTGAGCCGCA CTGGGAGAAG CGGCAGGCGG CGGTCATGGC GTACGAGAAG
GTGACGCTGT ACGGCGTCCC GATCGTCACC TCTCGCAAGG TCAATTTCGG TCGGATCGAT
CCGGTGACAA GCCGCGAGCT GTTCGTCCGG CACGCGCTGG TCGAGGGCGA CTGGCAGACC
CACCACCAGT TCTGGCGGGA CAACCAGCGG TTGCTCCACG AGGTGACCGA GCTGGAGAAC
CGGGTCCGAC GGCGGGACAT CCTGGTCGAC GACGAGACGA TCTTCCAGTT CTACGACGAG
CGGATACCCG CCGACGTCGT GTCCGGGCGA CACTTCGACG CCTGGTGGAA GCGGGAGCGC
CGGCAGCGAC CAGACCTGCT GACCTTCACC CGGGAGCTCC TGGTCAACGC CGGCCGCGAC
GGCGTGGACG GGGTCGGCTA CCCGGACGAG TGGCGAGCCG ACGGGGTACG GCTGCCGCTG
ACGTACCGCT TCGATCCCGG CACGGCGACC GACGGCGTGA CCGTGGACAT CCCGCTGCCG
CTACTCAACC AGGTTCCGGC GGAGAGCTTC GAGTGGCAGG TGCCGGGGCT CCGCGAGGAA
CTGGTAGTCG CGCTGATCCG CTCGTTACCC AAGGCGGTCC GGCGCAACTT CGTCCCGGTG
CCCGACTACG CCCGGGCCGT GCTCGCCGAG CTGTCCGCGG GCGAGGAGGA CCTGCTGGAC
GCGCTCACCC GGCAGCTGCG CCGGATGACC GGTGTGAGCG TCCCCCGGGA CGCCTGGGAT
GTCGCGAAGC TGCCGCCGCA CCTGCGAGTC ACCTTCCGGG TGCTCGGCGA GGATGACCGC
CCGGTCGCCG AGAGCAAGGA TCTGCCGGCG TTGCGCCGGC AGCTCACGGC GGAGGTACGT
CAGGTGGTGG CCGCCGCCGC GCCGGACGTG GCCCGCACCG GGCTGACCGA ATGGGAGATC
GGCACCCTGC CCCGCACGAT CGAGCAGGTC CGGGCCGGGT ACGCGGTCAC CGCGTACCCG
GCGCTGGTGG ACGAGGGTGC CACCGTCGGG GTGCGGGTTT TCGACTCCCC CGCCGAGCAG
GAGACCGCGC ACTGGGCGGG CACCCGACGC CTACTCCGAC TGAACGCGCC GTCCCCGGCG
AAGTTTCTCC AGGGACGGCT GTCCAACGAG GCGAAGCTGG CGCTCAGCCG TAACCCGCAC
GGTGGCGTAC CGGCACTGAT CGAGGACGCG GCCGGCGCGG CGATCGACAA GCTGACCGTC
GACGCGGGCG GACCGGCGTG GGACGCCGAC GGTTTCGCCG CTCTGCGCAC TACGGTCCGC
GCCGGGCTGG TGGACACCGT CGTCGAGGTC ATGGAGCGGG TGCGCGGGGT ACTCGCCGCC
GGGTACGCGA TCGAGCAACG ACTCGGTGCG ACGCGGAACC TGGCGGTGGT GGCCGCGCTC
GCCGACGTCC GCGGCCAGCT CACCGGTCTG ATCCATCCGG GCTTCATCAC CGAGACCGGG
TACGCGCGTC TGCCCGACCT GCGGCGCTAC CTGACCGCGA TCGAGCGTCG GCTGGACCGG
CTGCCCGGCA ACCCGGTCCG CGACAAGCAA CAGCAGGACC GGATCGCCGT CGTACAGCGG
GAGTACGCGG ACCTGCTGGC CGCACTGCCG CCGGCGAAGC GGCGCTCGGT TGCCGTCCGG
CAGATCCGGT GGATGATCGA GGAGCTGCGG GTGAACGTCT TCGCCCAGGC GCTGGGAACC
CCGTACCCGG TGAGCGAGCA ACGCATCTAC CGCGCCATGG ACAGCGCCGA GGACCACTGA
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| Protein sequence | MQNEAASTPS NATRELHRRL RPLMLRDQHR LRRRLDSARR IPDPQRRETA LAEITTDVVR
AEARLARRQA AVPTITYPTL LPVSDRREDI AAAIREHQVV IVAGETGSGK TTQLPKICLE
QGRGVHGLIG HTQPRRLAAR TVADRIAEEL GTELGDVVGY QVRFADQVSD RSLVKLMTDG
ILLAELQTDR MLRQYDTIIV DEAHERSLNI DFILGYLRQL LPRRPDLKVV ITSATIETDR
FARHFADAEG TPAPVVEVSG RTYPVEVRYR PLVEAGEDED DTDEEHVRDQ IQAIGDAVQE
LAAEGPGDIL VFLSGEREIR DTADALGKLV PHRPALRNTE ILPLYARLST AEQHRVFAPH
SGRRIVLATN VAETSLTVPG IRYVVDPGAA RISRYSNRLK VQRLPIEPIS QASANQRTGR
CGRTSDGICI RLYDEPDFQS RSEFTDPEIL RTNLASVILQ MTAIGLGDVA AFPFIDPPDR
RNITDGVNLL HELGALNPTE PDPAKRLTPL GRRLAQLPVD PRLARMVLEG ERNGCATEVV
VIAAALSIQD PRERPVDKQA QADQAHARFA DQESDFVAYL NLWRYLREQQ RARSSSGFRR
MCRSEYLNYL RVREWQDIVS QLRQALRTPE RNRRRGGPTA DGNGRRGGGA DLPEEVDTTK
VHQSLLAGLL SHVGLKDTQR NEYLGARGAR FALFPGSALA KKPPRWVMAA ELVETTRLWG
RVNGRIEPEW VEPIAQHLVK RSYSEPHWEK RQAAVMAYEK VTLYGVPIVT SRKVNFGRID
PVTSRELFVR HALVEGDWQT HHQFWRDNQR LLHEVTELEN RVRRRDILVD DETIFQFYDE
RIPADVVSGR HFDAWWKRER RQRPDLLTFT RELLVNAGRD GVDGVGYPDE WRADGVRLPL
TYRFDPGTAT DGVTVDIPLP LLNQVPAESF EWQVPGLREE LVVALIRSLP KAVRRNFVPV
PDYARAVLAE LSAGEEDLLD ALTRQLRRMT GVSVPRDAWD VAKLPPHLRV TFRVLGEDDR
PVAESKDLPA LRRQLTAEVR QVVAAAAPDV ARTGLTEWEI GTLPRTIEQV RAGYAVTAYP
ALVDEGATVG VRVFDSPAEQ ETAHWAGTRR LLRLNAPSPA KFLQGRLSNE AKLALSRNPH
GGVPALIEDA AGAAIDKLTV DAGGPAWDAD GFAALRTTVR AGLVDTVVEV MERVRGVLAA
GYAIEQRLGA TRNLAVVAAL ADVRGQLTGL IHPGFITETG YARLPDLRRY LTAIERRLDR
LPGNPVRDKQ QQDRIAVVQR EYADLLAALP PAKRRSVAVR QIRWMIEELR VNVFAQALGT
PYPVSEQRIY RAMDSAEDH
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