| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1703 |
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| Symbol | |
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| ID | 5704014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 1968167 |
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| End bp | 1970560 |
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| Gene Length | 2394 bp |
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| Protein Length | 797 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641271206 |
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| Product | RNA-binding S1 domain-containing protein |
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| Protein accession | YP_001536581 |
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| Protein GI | 159037328 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.247477 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00353536 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGACCCTCT CTGTTCATCA GCGGATCGCC GAGGAACTCG GCGTCGCCGA GCGCCAGGTA
CGCGCAGCCG TGGAACTACT CGACGGCGGC GCGACCGTGC CGTTCATCGC CCGCTACCGC
AAGGAGGCCA CCGGCCTGCT CGACGACACC CAGCTGCGCA CCCTCGAGGA GCGGATGCGC
TACCTGCGCG AGTTGGACCA GCGCCGGACT GCGGTCCTGG AGTCGATCCG GGGCCAGGGC
AAGCTCGACG AGACCCTGAC GGCACAGATC ATGGCAGCCG ACTCGAAGTC TCGGCTGGAG
GACATCTATC TGCCGTACAA GCCGAAGCGG CGGACCCGGG CACAGATCGC GCGCGAGGCT
GGACTGGAGC CACTCGCCGA CACACTGCTC GACGATCCCG CCCAAGACCC ACGCGCGACG
GCCGTCAGGT TCGTCGACCC GGACCGGGGC ATCGCCGACC CGTCCGCCGC ACTGGACGGT
GCCCGCGCCA TCCTCGTCGA ACGGTTCGCC GAGGACGCCG ACCTGATCGG CACGCTACGC
GAGCAGATGT GGTCACGGGG CCGGCTGGTG TCCCGGGTAC GCGATGGTCA GGCCACGGCC
GGCGCCAAGT TCGCCGACTA CTTCGACTTC GCCGAGCCGT ACCCGAAACT GCCCTCGCAC
CGGGTCCTCG CCGTGTTCCG GGGGGAGAAG GAGGGTGTGC TCGACCTGAC CATGGAGCCG
GAGCAGCAGG AGAACCCGGA TCCAGCGACC ACCGGTCCGA CCCGGTACGA GGCGGCCGTC
GCCGCCCGGT TCGGGGTCAG TGACCGGGGA CGGCCGGCCG ACCGGTGGCT CTCCGACACG
GTGCGCTGGG CCTGGCGTAC CCGAATCCTG ATCCACCTCG GCGCGGACCT TCGCATGCGG
TTGTGGCAGG CCGCCGAGCA GGAAGCGGTG CGGGTCTTCG CCACGAACCT GCGGGACCTG
CTGCTGGCCG CCCCGGCCGG GGCCCGGACG ACGATGGGCC TGGATCCCGG CCTGCGCACC
GGGGTGAAGG TCGCCGTCGT TGACGCGACG GGCAAGGTGG TCGCCACCGA CACCATCTAC
CCGCACGAGC CGCGCCGGCA GTGGGACGCC TCGATCGAGA CCCTCGCCCG TCTCGCCACC
GCGCACCAGG TCGAGTTGGT CGCGATTGGT AACGGCACCG CGAGCCGGGA GACCGACCGA
CTCGCCGCAG AGCTGATCCG GCGCCACCCA CAGCTGAACC TCACCAAGCT CGTCGTGTCC
GAAGCCGGCG CTTCGGTCTA CTCAGCGTCC GCGTACGCCG CGCAGGAGCT GCCGGGCCTG
GACGTGTCGC TGCGGGGGGC GGTCTCCATC GCCCGTCGCC TCCAGGACCC ACTCGCCGAA
CTGGTCAAGA TCGATCCCCG GTCCATCGGA GTCGGGCAGT ACCAACACGA CCTGTCCGAG
GTGACGTTGT CCCGGTCGCT CGACGCGGTG GTCGAGGACT GCGTCAACGC GGTCGGCGTC
GACGTCAACA CCGCCTCCGC GCCACTGCTG ACCCGGGTCT CCGGCATCGG TGCCGGACTG
GCGGAGAACA TCGTGCTGCA CCGGGACGCC AACGGGCCCT TCCGAACCCG GGGCGACCTG
CGACGGGTAC CCCGGCTTGG TCCGAAGGCA TTCGAGCAGT GCGCGGGCTT CCTGCGCATC
CCCGACGGTG CCGACCCGCT GGACTCGTCG AGCGTGCACC CGGAGGCGTA CCCGGTGGTG
CGGCGGATCC TCGCCGCCAC GAAGCAGGAA CTGCGGATGG TGATCGGCCG CAGCGCGGTC
CTGCGCGGGC TGCGGGCCGC CGATTTCGTC GACGAGACCT TCGGGCTGCC GACGGTCACC
GACATCCTCG CCGAGTTGGA GAAACCCGGC CGGGATCCGC GGCCGGAATT CCGCACCGCC
ACGTTCACCG AGGGCGTGGA GACGATCACC GACCTGGTGC CCGGGCTGAT CCTCGAGGGC
GTGGTCACCA ACGTCGCCGC CTTCGGCGCG TTCGTGGACG TCGGCGTGCA TCAGGATGGC
CTGGTACATG TCTCGGCGAT GTCCCGCGCC TTCGTTCGCG ACCCTCGCGA GGTGGTGAAG
TCCGGTGACG TGGTGAAGGT CAAGGTCCTC GACGTGGACG TGCCACGCAA GCGCATCTCG
CTGACCCTTC GACTGAACGA TACCGAGGCC GGTCGCGGCG GAGCGCATGG CCAGCGGGAC
CGCGGTGGCG ACCGGGAGGC CAACCGCGGC GAGTCCCGAG GCCGCGGTGG GCAGCAGGCC
CGCGGTGGGC AGCAGGCCCG CGGTGGGCAG CCGCAACCCA GACGTGGCGG CGCCACGCCG
CCCCCGGCCA ACGACGCGAT GGCCGATGCC CTGCGTCGCG CCGGCCTCGC CTGA
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| Protein sequence | MTLSVHQRIA EELGVAERQV RAAVELLDGG ATVPFIARYR KEATGLLDDT QLRTLEERMR
YLRELDQRRT AVLESIRGQG KLDETLTAQI MAADSKSRLE DIYLPYKPKR RTRAQIAREA
GLEPLADTLL DDPAQDPRAT AVRFVDPDRG IADPSAALDG ARAILVERFA EDADLIGTLR
EQMWSRGRLV SRVRDGQATA GAKFADYFDF AEPYPKLPSH RVLAVFRGEK EGVLDLTMEP
EQQENPDPAT TGPTRYEAAV AARFGVSDRG RPADRWLSDT VRWAWRTRIL IHLGADLRMR
LWQAAEQEAV RVFATNLRDL LLAAPAGART TMGLDPGLRT GVKVAVVDAT GKVVATDTIY
PHEPRRQWDA SIETLARLAT AHQVELVAIG NGTASRETDR LAAELIRRHP QLNLTKLVVS
EAGASVYSAS AYAAQELPGL DVSLRGAVSI ARRLQDPLAE LVKIDPRSIG VGQYQHDLSE
VTLSRSLDAV VEDCVNAVGV DVNTASAPLL TRVSGIGAGL AENIVLHRDA NGPFRTRGDL
RRVPRLGPKA FEQCAGFLRI PDGADPLDSS SVHPEAYPVV RRILAATKQE LRMVIGRSAV
LRGLRAADFV DETFGLPTVT DILAELEKPG RDPRPEFRTA TFTEGVETIT DLVPGLILEG
VVTNVAAFGA FVDVGVHQDG LVHVSAMSRA FVRDPREVVK SGDVVKVKVL DVDVPRKRIS
LTLRLNDTEA GRGGAHGQRD RGGDREANRG ESRGRGGQQA RGGQQARGGQ PQPRRGGATP
PPANDAMADA LRRAGLA
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