| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1657 |
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| Symbol | |
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| ID | 5703558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 1906820 |
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| End bp | 1908412 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641271161 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001536536 |
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| Protein GI | 159037283 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.22349 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGACG TCACCCTCCG GGCCCTGTGC CTCCTCGAGG AGGCACAGGC CGGCGGCGCG
GCCCAGGTGC TGGTGGCCGC CGAGTCCGCG CTGCGGACAC CGACCGGAGA CATCTGCGAC
GGCCCGGCCG CGATGCACTT CGCGCGCGTT GTGGCGTTGA CCCGACTGGG TGACCTGCGG
GGTGCCGTCA CCGCAGCCGA CCTGATGCTG GCCGCCGCGG ACCGGGAGCA CAGCGTGGGA
TGGCGTTCGT GCGCGCTGTC GCTGCGTGCC ATCAGGCGGC TGCGTCTCGG CGACCTGGAC
ATCCGTGAGC ACGACATCGT CGCGGTGCTC CGGGATCTGG TCACCGCGGA GACCGCTCTG
CTCGCCGGTG AACCCGACCC CGTGATCGCG GGCAACGCCC ACACCGGGAT CGCGATCGGG
TACGCGCAGC TGCGCCTGTA CGAGCTGGCC GAGCCCCAGT TCCAGGCGGC GTACGAATCC
ACCTGTCAGG CGTCGTACCC GGACAACGGC AACCGGGCGA TGTGGCTGTG CAACCTCGCC
GAAAGTAACC TGATGTGGGC CTTGGAGCTG TACCAGGTCG GCCAGGTGGC GGAGGCGGAG
CAGCACCTCA CGGTGGCCGA GGAGCACGCG GTACGGGCGG CGGCGGAGGC CTCCGGGCCG
AAGGCGGAGG TGTGGCGGCA CCTCGGGTTG CTCTTTGCGG CGTCCGCGCG TGCCGAAGGC
CGGGATCCGA CCGGCGCGGC CGATGACATC CCTCGGTACA TCGCCCAACT CCAGGCGTTC
GGCGTGCCCG CGCAGCAGGC GGAGGTGCTG CTGTGCCGGC CCTTCCACGC GGTCGCGCTC
AACCGCTCCG GTCGGCTGGA CGAGGCCCTG CGCGTCATCG AGGAGGCCGT CGTCGACCTG
TCGCCCGACG TCGCCTGGCT GGTGTCGGCG GCGTTGCACC GGACGCACGC GGTGTTGCTG
GCCAGGAACG GATCACGCGA TGCCGGGCCG GGACTCACCT ACGGCGACGC GCTCGCGGAG
CTGCTGTGGC GCCAACGGCA CCGCTGGCTG CACGCGGCGG TGTCGATGCA GTCGTACGAC
GTCCTGCGGT GGCAGCACGA GCAGGCCGAG CGGGCGGCAC GGACCGACCC GCTGACCGGG
GTGGCGAACC GGCGGGGGCT CGACAACTTC CTGCGGAAGC TGGCGGACCC GGGCACCGTC
GACGACGACC GGGTCGCGGT GCTCACCCTG GACATCGACT GCTTCAAGCG GATCAACGAC
TCGCAGGGGC ACGCCGCCGG CGACGACGTG CTGCGCGCGG TGGCGAAGGC GCTGACGACC
AGCGTCCGCA AGGGCGACTT CGTGGCCCGA CTGGGCGGCG ACGAGTTCGT CGCCATCCTC
CCCGGTGCCG ACTGCGCCGC CGCCGAGCAG GTGGCCCTGC GGGCGGTCGA CGCCGTGAGC
GGACTGACGC CGTGGCGGAC GGGGGTCAGC GTCGGGGTCG CCAGCGGTAC CGCTCACGCG
CTGGGGGTGT CCCTCGCTGA CGCCGATCGT GCGATGTACG CCGCGAAGCG GGCCGGCGGC
AACCAGGTGA GCCGCTGTCA CGTCGCGAGC TGA
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| Protein sequence | MDDVTLRALC LLEEAQAGGA AQVLVAAESA LRTPTGDICD GPAAMHFARV VALTRLGDLR
GAVTAADLML AAADREHSVG WRSCALSLRA IRRLRLGDLD IREHDIVAVL RDLVTAETAL
LAGEPDPVIA GNAHTGIAIG YAQLRLYELA EPQFQAAYES TCQASYPDNG NRAMWLCNLA
ESNLMWALEL YQVGQVAEAE QHLTVAEEHA VRAAAEASGP KAEVWRHLGL LFAASARAEG
RDPTGAADDI PRYIAQLQAF GVPAQQAEVL LCRPFHAVAL NRSGRLDEAL RVIEEAVVDL
SPDVAWLVSA ALHRTHAVLL ARNGSRDAGP GLTYGDALAE LLWRQRHRWL HAAVSMQSYD
VLRWQHEQAE RAARTDPLTG VANRRGLDNF LRKLADPGTV DDDRVAVLTL DIDCFKRIND
SQGHAAGDDV LRAVAKALTT SVRKGDFVAR LGGDEFVAIL PGADCAAAEQ VALRAVDAVS
GLTPWRTGVS VGVASGTAHA LGVSLADADR AMYAAKRAGG NQVSRCHVAS
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