| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1620 |
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| Symbol | |
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| ID | 5703401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 1854415 |
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| End bp | 1855398 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641271128 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_001536503 |
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| Protein GI | 159037250 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.676362 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAACC GAACTGCACT CACCCGCCTG GTGGCCGGCT CCACGCTGGT CGCCCTCGCG
CTCAGCGGCT GCTCGGTGAC CACCGAGGAG TCCGGCGCCG ACGTATCAGT CGGCAAGGGG
TCGATCAAGG AAGACTCCTC CCTCAAGGGA CAGACCATCG TGGTCGGTTC CAAGGACTTC
ACCGAGAACA TCGTCTTCGG GCACATCACG ATGCAGGCAC TGACCGCCGC CGGCGCGGAG
GTCGAGGACA AGACCAACAT CAAGGGCTCG GTCAACGTCC GCAAGGCGCT CCTCAGCGGT
GACGTCGACG TCTACTGGGA CTACACCGGC ACGGCGTGGA TCACCTACCT CGACCACGCC
GACCCGATTC AGAACTCCGC CGAGCAGTAC GCGGCCGTGG TCAAGGAAGA CAAGGAAAAG
AACAACGTGG TCTGGGGGGC CTTTGCCCCC GCGAACAACA CCTACGCCCT CGCGGTACGC
GAGGAGAAGG CCGAGGAGTG GAACCTCAAC ACGCTGTCCG ACCTGGCCGC GTTCGCCAAG
AGTAACCCGG AGGACGCGAC GTTCTGCCTG GAGAGCGAGT TCGTCGGGCG CAACGACGGC
TGGCCCGGGA TGACCAAGGC GTACGGGATG AACGTCCCGG CGGACAGCGT CAAGGTGGTC
GACACCGGCG TCGTCTACAC CGAAACGAAG AAGGGCGAGG CCTGCAACTT CGGCGAGGTG
TTCACCACCG ATGGACGGAT CAGTCACCTG AACCTACGGG TGCTGGAGGA TGACCAGAGC
TTCTTCCCGA TCTACAACCC GGCCCCCACG CTCAATGGGG ACACGGCCGC TTCGTACGGC
AGCATCCTGA CGATTCTCGA GCCGATCGTG GCCAAGCTCG ACGACGATAC CCTCCGGCAG
CTCAACGAGA AGGTGGATGT CGACGGTGAG CCGGTGGCGC AGGTCGTCTC CGAGTGGCTG
AAGGCCGAGG GCTTCATCGG CTGA
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| Protein sequence | MRNRTALTRL VAGSTLVALA LSGCSVTTEE SGADVSVGKG SIKEDSSLKG QTIVVGSKDF
TENIVFGHIT MQALTAAGAE VEDKTNIKGS VNVRKALLSG DVDVYWDYTG TAWITYLDHA
DPIQNSAEQY AAVVKEDKEK NNVVWGAFAP ANNTYALAVR EEKAEEWNLN TLSDLAAFAK
SNPEDATFCL ESEFVGRNDG WPGMTKAYGM NVPADSVKVV DTGVVYTETK KGEACNFGEV
FTTDGRISHL NLRVLEDDQS FFPIYNPAPT LNGDTAASYG SILTILEPIV AKLDDDTLRQ
LNEKVDVDGE PVAQVVSEWL KAEGFIG
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