Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1610 |
Symbol | |
ID | 5703465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 1840742 |
End bp | 1842043 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641271119 |
Product | polymorphic outer membrane protein |
Protein accession | YP_001536494 |
Protein GI | 159037241 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00898059 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACCATC AGCACCACAC CCACGAACTC GAACCGGACC GGGGCCGGGT GAGGTCACGG CGGCGGTGGT GGGCTGTCGG GCTCGCCGGG ATGACCGGCC TGGCCCTCAC CACCACTGTC GGCGTCGCTG CCATCCCAGC CGCCGGCGCG GTCGCACGTA CCCTCACCAC CACCGGCGAC CACCCCGAGA AGCCGTCCCT TGGCGACCAC CGGGGCAAAA GCGACGGCGA CAAGGGCGAG GCGAAGCGGG AGACGAAGCC GAAGGGCATC CCGGTCCCCT GTGACCCGGA CCGGCTGATC GCCGAGATCA ACCTCGCCAA CGCTCGCGGC GGAGCCACCC TCGACCTCGC CAAGAAATGC GCATACACCC TGACCGCCGA CATCGACGGC GCCGGACTGC CTGCCATCAC CACCCCCATC ACGCTCAACG GTGGCAAGAG CACCACTATC ACCCGCGCCG CGGCAGCCGA GCCATTCCGC ATTCTCAACG TCAACGTCAA CGGCCGGCTC ACCCTCAACC ACCTCACCAT CACCGGTGGC CAACCAGCGC CCGGTGGTCA GGGGGGTGGG ATTCTTGTCA ACCCGGGCGG CGGCGCCACA ATCAACCACA GTAGAGTCGT CCGTAATATA TCGGGTAACA ATGGTGGTGG AGTTGCGAAT CTCGGTGGCA GCCTCGAAAT CAGGAACTCC ACTGTCGGTC ATAACACCGC CGCTATTACG GGAGGTGGGG TCGTCAGCGC TGGGAAACTC GTGGTCGACA AGTCCCGTTT CGATGCCAAC ACCGCCTCGG CTGCCGGAGG CATTGGCGTC AGTGGTGTAC TGAGTATCAC CCGGAGCGAG ATTGTCAACC ATCGGGCCGG GACCGGTGGA GGTATGTTCA TCTTCGCCGC GACCGGCACG ATCAGCGACA CACGCTTCGA AAGGAACACC ACGACGGACG TTGGTGGAGC CGCCATAGGC GGCGGGCCGC TGCAGCTCAC CCTGTCGCGC GTCACCATCG CCAACAACAC CGCCACCAGT GGGCTGGGCT TCGGTGCCCT GTTTCTGCAG GGCGGTACCG CCCTGGTCGA GGACAGTGTC ATCAGGGACA ACATCGGAAC CAACGGCGGC GGCATCCGCA ACCTGGGCAC GTTGACGCTG ATCCGCACCA AGGTCACCGG CAACCAAGCC ACCGGGTCGG GCGGCGGAGT GTTCAACGAA TTCATCGGCC GCCTCGCTCT TTTCGCAACC CACATCACCA AGAACACTGC CGGTAGCGAC GGCGGGGCAT TGTCAACCAG GCGGGTGGCA TCGTCGACCT GA
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Protein sequence | MNHQHHTHEL EPDRGRVRSR RRWWAVGLAG MTGLALTTTV GVAAIPAAGA VARTLTTTGD HPEKPSLGDH RGKSDGDKGE AKRETKPKGI PVPCDPDRLI AEINLANARG GATLDLAKKC AYTLTADIDG AGLPAITTPI TLNGGKSTTI TRAAAAEPFR ILNVNVNGRL TLNHLTITGG QPAPGGQGGG ILVNPGGGAT INHSRVVRNI SGNNGGGVAN LGGSLEIRNS TVGHNTAAIT GGGVVSAGKL VVDKSRFDAN TASAAGGIGV SGVLSITRSE IVNHRAGTGG GMFIFAATGT ISDTRFERNT TTDVGGAAIG GGPLQLTLSR VTIANNTATS GLGFGALFLQ GGTALVEDSV IRDNIGTNGG GIRNLGTLTL IRTKVTGNQA TGSGGGVFNE FIGRLALFAT HITKNTAGSD GGALSTRRVA SST
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