Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1596 |
Symbol | |
ID | 5706000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 1827212 |
End bp | 1827730 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641271105 |
Product | hypothetical protein |
Protein accession | YP_001536480 |
Protein GI | 159037227 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.966285 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000627206 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACCTCGA TCAGTAGCGA TGAGTTCGAT CGTTTGCTGC GAACCTTCGA GCACCAGTCG AGCCATCTGG AAGCCCGGGA CTCCTACGGC ACGTCAGTTG AGTTGCCGTA CATGGCGAAA TGGTTGGCCG GGGAATCCGA TGACCTCGCC TGGTTGGACG ACTGGTGTGC GATCCTGCGC CAGCATGTGG CGGCCGGCAG GGCAGCCCGC CGGGCACGAA TCGTCTCCGA GCCTCTCAGC GACTATCAGC GCTGGTCGTA CAGCATCGCG CACCCAATGG TCGACGCCGG CGAGGACATT CGATGGGTTC CCCGACGCCT CGTGTCGTCA ATCGGCATCC CCGGTAACGA CTTCTACCTG TTCGATGATC ACCTCGTGGT CTTCCTGATC TACAGCGGCA ACGGACTCAA CGCCGCCTAC GAGACGTCAA CCGACCCAGC GGACATTGAG CTGTGTCGCT CGGCGTTTGC CGCCGTGTGG AAGGTGGCCG TACCGCACCA TGGCTACCAA CCCGCCTAG
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Protein sequence | MTSISSDEFD RLLRTFEHQS SHLEARDSYG TSVELPYMAK WLAGESDDLA WLDDWCAILR QHVAAGRAAR RARIVSEPLS DYQRWSYSIA HPMVDAGEDI RWVPRRLVSS IGIPGNDFYL FDDHLVVFLI YSGNGLNAAY ETSTDPADIE LCRSAFAAVW KVAVPHHGYQ PA
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