Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1549 |
Symbol | |
ID | 5706751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 1782662 |
End bp | 1783612 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641271060 |
Product | SpoOM family protein |
Protein accession | YP_001536436 |
Protein GI | 159037183 |
COG category | [R] General function prediction only |
COG ID | [COG4326] Sporulation control protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0376095 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0300138 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCTTCA AAAAGATGTT GAGCGCGTTA GGCGTAGGCG GCCCCAGCGT GGACACCGTC CTCACGAACC CGAACACCCG GCCTGGCCTG ACCCTGGACG GCCAGGTCAA CCTGATCGGC GGGGACTCGC CCGCGGCCAT CGAGCAGATT GTCGTCGGCC TGGTCACCCG GGTCGAGATC GAGGGCCACG ACACGGAGTA CGCGGGGCTC ATGGAGTTCC AGCGGATGCC GGTCTCCGGG CCGCTGCAAC TGACTCCCAA GCAGCAGCTG TCGATCCCGT TCCAACTGCC GGTGCCGTGG GAGACCCCGA TCACGGACGT GTACGGCCAG CGGCTGCACG GCATGACGAT GGGCCTGCGT ACCGAGTTGG CGATCGCCCG CGCCGTGGAC AAGAGCGACC TGGACCAGGT CAACGTTCAT CCGCTGCCAG TGCACGAGCG CATCCTGGAG GCGTTCACCC GGCTCGGCTT CCGGTTCAAG AACGCCGACC TGGAACGCGG TCACCTGCAC GGTGTGCAGC AGACACTGCC GTTCTACCAG GAGATCGAGT TCTTCGCCTC CCCGCAGTAC GCGCAGACGA TCACCGAGGT GGAACTGACG TTCGTCACCA ACCCGCAGGG CGTCGACGTC ATCCTGGAGT GCGACAAGCG CGGCGGCTTC TTCACCTCCG GGCAGGACGT GTTCGGCCGC TACCAGGTCG CGCACCAGGA CGCCGACCGG GTGGACTGGG TGCAGGTCGT CGACGGGTGG TTGCGCGAGA CGACCTCCCG CTACGGCAGC CTGCGGGCGC AGGGCTTCGG CGTCCCGCAC CAGCACGGCC AGCGTGGGAT GGGCATGGGC GGAGTGATCG CCGGTGCGGC TCTCGGTGTG GCCGGCGGCA TGATCGCCGG TGAGATGATC GAGGACGCGA TCGAGGGTGA CTTCGCCGAG GACTTCGGCT TCGACGAGTA A
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Protein sequence | MVFKKMLSAL GVGGPSVDTV LTNPNTRPGL TLDGQVNLIG GDSPAAIEQI VVGLVTRVEI EGHDTEYAGL MEFQRMPVSG PLQLTPKQQL SIPFQLPVPW ETPITDVYGQ RLHGMTMGLR TELAIARAVD KSDLDQVNVH PLPVHERILE AFTRLGFRFK NADLERGHLH GVQQTLPFYQ EIEFFASPQY AQTITEVELT FVTNPQGVDV ILECDKRGGF FTSGQDVFGR YQVAHQDADR VDWVQVVDGW LRETTSRYGS LRAQGFGVPH QHGQRGMGMG GVIAGAALGV AGGMIAGEMI EDAIEGDFAE DFGFDE
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