Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1533 |
Symbol | |
ID | 5708324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 1767167 |
End bp | 1769569 |
Gene Length | 2403 bp |
Protein Length | 800 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641271044 |
Product | putative phosphoketolase |
Protein accession | YP_001536420 |
Protein GI | 159037167 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3957] Phosphoketolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000465946 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGACAGCG CAACCGCCCA GGACCGCCCC CTGACCGAGA CCGAGCTGCG CCGGCTGGAC GCGTACTGGC GGGCGGCGAA CTACCTCACC GTCGGGCAGA TCTACCTCCG GAGCAATCCG CTGCTGCGCG AACCGCTGAC GCCGGAGCAT GTCAAGCCGC GGCTGCTCGG GCACTGGGGC ACCAGCCCCG GCCTGAACCT GCTGTACGCG CACCTCAACC GGGTCATCGT CGCCCGTGAC CTGAACGCCA TCTACATCAC CGGGCCTGGC CACGGCGGTC CCGCGATCGT GGCGAACACC TGGTTGGAGG GCACCTGGAG CGAGCTCTAC CACGGCACCG GCCGAGACGA GGCCGGCATG GCGCAGCTGT TCTGCCAGTT CTCCTTCCCC GGTGGCATTC CCAGCCACGT GGCCGCGGAG GTGCCGGGGT CGATTCACGA GGGCGGTGAG CTCGGGTACG CGCTCAGCCA CGCCTACGGG GCCGCGTTCG ACAACCCGGA CCTGCTGGTC GCGTGCGTGA TCGGTGACGG TGAGGCGGAG ACCGGGCCAC TGGCCGGCAG TTGGCTGTCC AACGTGTTCC TGAATCCGGC CCGCGACGGC GCGGTGCTGC CGATCCTGCA CCTCAACGGC TACAAGATCG CCAACCCGAC GGTGCTGGAC CGGATCCCCG AGTCCGAGTT GCTGGATCTG CTGCGCGGAT ACGGCCACCA TCCATACCTG GTCGCCGGGG AAGATCCCGC CACCGTGCAC CAGGCGCTCG CCGCGACCCT GGACCGGGCC CTGGACGAGA TCGCCGCCAT CCAGCGGCGG GCCCGGTCGG GTGGCCCGGT CGAGCGCCCC CGTTGGCCGA TGATCGTGCT GCGCACGCCG AAGGGCTGGA CCGGCCCCCG GGAGGTCGAC AACACGCCGG TGGAGGGCAC ATACCGTGCA CACCAGGTGC CGCTGTCGCA GGTACGCAGC AACCCGCAGC ACCTGGCCGA GTTGGAGCGC TGGCTGCGCA GCTACCACCC GGAGGAGCTC TTCGACGCGA CCGGGGCGCC GGTCGCCGAG CTGATCGCAC TGCCGCCGAA GGGTGACCGC CGGATGAGCG CCAACCCGGT CGCCAACGGC GGGCAGGTGT TGCGTGATCT GGTCCTGCCG GATTTCCGCG ACTACGCGGT CGACGTGCCA CGGCCCGGCG AGCCGGTCAC CAGCGCCACC GGCGCGCTCG GCACCTGGAT CCGCGACGTC ATCGCCGCGA ACCCGGAGTC GTTCCGGCTC TTCGGCCCAG ACGAGGTTGC CTCGAACCGG CTCGGTGCCG CCTTCGAGGT CACCGACCGG GCCTGGGTGG CGGAGACCGT ACCCGGCGAC GACCACCTCT CCCCGGACGG GCGGGTCATG GAGGTACTCT CCGAGCACCT GTGCCAGGGC TGGCTCGAGG GGTACCTGTT GACCGGCCGA CACGGCCTGT TCACCAGCTA CGAAGCATTC ATCCACATCG TCGACTCGAT GGTCAACCAA CATGCCAAGT GGCTGAAGGT CACCCGGGGC ATTCCCTGGC GGCAGCCGCT GGCCTCACTG AACTACCTGC TGTCCAGCCA CGTCTGGCGG CAGGACCACA ACGGCTTCTC CCACCAGGAC CCGGGGTTCA TCGACCACGT GATGAACAAG AAGGCCGAGG TGGTCCGGGT CTACCTGCCG CCGGACGGCA ACACCCTGCT CTCCACGTTG AACCACTGCC TGCGTAGCCG GCACTACATC AACGTGGTCG TCGCCGGCAA GCAACCGACA CCGAACTGGC TGCCGATGGA CGAGGCGATC CTGCACTGCC GGCGCGGCAT CGGCATCTGG GGCTGGGCCA GCAACGACGG CGATTCGGAG CCGGACGTGG TGCTCGCCTG CGCCGGTGAC GTGCCCACAC TGGAAACCCT CGCGGCGGCC GACCTGCTGC ACCAACACCT GCCCGACCTG AAGGTGCGGG TGGTCAACGT GGTCGACCTG ATGCGCCTCC AGCCGTCGAG CGAGCACCCG CACGGGCTGC CGGACACGGA GTTCGACACC ATCTTCACCA CCGACAAGCC GATCATCTTC GCGTACCACG GCTACCCGTG GCTCATCCAC CGCCTGACCT ACCGACGGAC CAACCACCCC AACCTGCACG TGCGCGGCTA CAAGGAGGAG GGCACCACCA CCACTCCGTT CGACATGGTG ATGCTCAACG ACCTGGACCG GTTCCATCTG GTCATCGACG TGATCGACCG GGTACCCGGC CTCGCCGCGC GGGCCGCGCA CCTGCGGCAG GCGATGGTCG ACGCACGCCA GTCGTGCCGG GACTACACCC GCGCGCACGG CGCCGACGAC CCACGGGTGG CGCAGTGGCG GTGGACCCGC GGGACGGACG CCGACGACAG CGACGACCGA TGA
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Protein sequence | MDSATAQDRP LTETELRRLD AYWRAANYLT VGQIYLRSNP LLREPLTPEH VKPRLLGHWG TSPGLNLLYA HLNRVIVARD LNAIYITGPG HGGPAIVANT WLEGTWSELY HGTGRDEAGM AQLFCQFSFP GGIPSHVAAE VPGSIHEGGE LGYALSHAYG AAFDNPDLLV ACVIGDGEAE TGPLAGSWLS NVFLNPARDG AVLPILHLNG YKIANPTVLD RIPESELLDL LRGYGHHPYL VAGEDPATVH QALAATLDRA LDEIAAIQRR ARSGGPVERP RWPMIVLRTP KGWTGPREVD NTPVEGTYRA HQVPLSQVRS NPQHLAELER WLRSYHPEEL FDATGAPVAE LIALPPKGDR RMSANPVANG GQVLRDLVLP DFRDYAVDVP RPGEPVTSAT GALGTWIRDV IAANPESFRL FGPDEVASNR LGAAFEVTDR AWVAETVPGD DHLSPDGRVM EVLSEHLCQG WLEGYLLTGR HGLFTSYEAF IHIVDSMVNQ HAKWLKVTRG IPWRQPLASL NYLLSSHVWR QDHNGFSHQD PGFIDHVMNK KAEVVRVYLP PDGNTLLSTL NHCLRSRHYI NVVVAGKQPT PNWLPMDEAI LHCRRGIGIW GWASNDGDSE PDVVLACAGD VPTLETLAAA DLLHQHLPDL KVRVVNVVDL MRLQPSSEHP HGLPDTEFDT IFTTDKPIIF AYHGYPWLIH RLTYRRTNHP NLHVRGYKEE GTTTTPFDMV MLNDLDRFHL VIDVIDRVPG LAARAAHLRQ AMVDARQSCR DYTRAHGADD PRVAQWRWTR GTDADDSDDR
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