Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1525 |
Symbol | |
ID | 5708316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 1756170 |
End bp | 1758257 |
Gene Length | 2088 bp |
Protein Length | 695 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641271036 |
Product | coagulation factor 5/8 type domain-containing protein |
Protein accession | YP_001536412 |
Protein GI | 159037159 |
COG category | |
COG ID | |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.299502 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000931017 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGCGAGCC GAGCGACCCG TCGGCGATCT GCGGTGGGGA GCCGGGCGGT CCGTCGGCGA TCGGTGGTGG CGACCGTCCT GCTCGCCGTG ACCGCGCTGC TGCTCAGCAC GGCGGCACCC GGTGCGGCGG AGGAGTCCGA CTGGTGGACG CCGACCGCCC GGCCGGCACC CGACTCCGCG ATCGGCGTCA CCGGTGCGCC GTTCACCGGC ACCGACGCGC AGGGGCAGGT GCGGGGTTTC GTCGACGCGC ACAACCACCT GATGTCCAAC GAGGCGTTCG GTGGGCGGCT GCTCTGCGGC AAGCCGTTCT CCGACGAGGG CATCGCCGAC GCGCTCCGGG ACTGTCCGGA GCACTACCCG GACGGATCCC TGGCCCTGTT CGACTTTCTC ACCAACGGCG GCGACGGTCG ACACGACCCC GACGGTTGGC CGACGTTCGC GGACTGGCCG GCGCACGACT CGCAGACCCA CCAGCAGAAC TACTACGCCT GGATCGAGCG GGCCTGGCGC GGCGGCCAGC GGGTCCTCGT CAACCATCTG GTCACCAACG GGGTGATCTG CTCGGTCTAC TTCTTCAAGG ACCGTAGCTG CGACGAGATG ACCTCGATTC GGCTCCAAGC CGCCAAGACG TACGAGATGC AGGACTACAT CGACCAGATG TACGGCGGAG CGGGCCGGGG ATGGTTCCGG GTCGTCACCG ACAGCGACCA GGCCCGCGAG GTCATCCAGC AGGGCAAGCT CGCCGTCATC CTGGGCGTCG AAACCTCAGA GCCGTTCGGC TGCAAACAAA TCCTGGACAT CGCACAGTGC GACCAGGATG ACATCGATCG CGGTCTCGAC GAGTTGTACG GTCTCGGCGT GCGCAGCATG TTCCTGTGCC ACAAGTTCGA CAACGCGCTG TGTGGCGTCC GATTCGACTC CGGGACCACC GGAATCGCGG TCAACGCCGG CCAGTTCCTG TCCACCGGAA CCTTCTGGAT GACGGAGCCG TGCAGGGGAC CACAACAGGA CAATCCCATC ACGTCAGGGG AGGCCGCCGG GCTGGAGGAA GCGCTGCCCG CCGACGTGCA GATGCCGTCG TACTCGGCGG ACGCCCGGTG CAACGTCCGC GGGCTGACCA GCCTCGGTGA GTATGCCCTG CGGGGCATGA TGGAACGCAA CATGATGGTC GAGATCGACC ACATGAGCGT CAAGGCCACC GGCCGAGCCC TGGACATCCT CGAGTCCGTC TCCTACCCCG GTGTGGTCTC GTCGCACAGT TGGATGGACC TGCTCTGGAG CGAACGGGTC TACCAACTCG GCGGGTTCAT CACGCAGTAC ATGCACGGTG CCGAGCGGTT CATCGCGGAC GCGGATCGCA CGAAGGCGCT GCGGGACAGC TACGGCGTCG GGTACGGCTT CGGCACCGAC ATGAACGGCT TCGGTAGCTG GCCCGGCCCG CGGGGCGCGG ACACCCCGAA CCCGGTTCAG TATCCGTACC AGTCCGCGCA CGGCGGCGCC GTCCTCGACC GGCAGACCAC CGGCGAGCGG ACCTGGGACA TCAACGTCGA CGGGGCCGCC CACTACGGAC TGGTGCCCGA CTGGGTGGAG GAGATCCGGG TCCTGGGAGG CCAGGCGGTC GTGGACGACC TGCTGCGGGG CGCCGAGTCG TACCTCGGCA CGTGGGGGTC CACCGAAGCC CACGCGCCCG GCGTGAACCT CGCCACGGGA TCGTCCGCGG CGGCCAGCTC GACCGCGTGG AAGCCGTTCA CCACCTTCGT GCCGCGTAAG GCCGTGGACG GCGACCCGAA GACCCGCTGG GCGAGCTGGT GGAGTGACGA CCAGTGGCTG CGGCTGGACC TCGGATCACC ACACCTGATT CGTCGGGTCA CGCTGGACTG GGCGGGCGAG TACGCCACGG TGTACCGGAT CGAGGTGAGC ACCGACGGCA GCGTCTGGCG GACCGTGTCG TCCACGTCGG CCGGTGACGG TGGTCTGGAC ACGGCGACCT TCGCCGCCAC GTCGGCCCGC TACGTCCGCA TCCACGCTCA GGACCGCGGG ACCGTGTGGG GCTACTCGCT GAAGGAGGTC GGCGTCCACG CCACCTGA
|
Protein sequence | MASRATRRRS AVGSRAVRRR SVVATVLLAV TALLLSTAAP GAAEESDWWT PTARPAPDSA IGVTGAPFTG TDAQGQVRGF VDAHNHLMSN EAFGGRLLCG KPFSDEGIAD ALRDCPEHYP DGSLALFDFL TNGGDGRHDP DGWPTFADWP AHDSQTHQQN YYAWIERAWR GGQRVLVNHL VTNGVICSVY FFKDRSCDEM TSIRLQAAKT YEMQDYIDQM YGGAGRGWFR VVTDSDQARE VIQQGKLAVI LGVETSEPFG CKQILDIAQC DQDDIDRGLD ELYGLGVRSM FLCHKFDNAL CGVRFDSGTT GIAVNAGQFL STGTFWMTEP CRGPQQDNPI TSGEAAGLEE ALPADVQMPS YSADARCNVR GLTSLGEYAL RGMMERNMMV EIDHMSVKAT GRALDILESV SYPGVVSSHS WMDLLWSERV YQLGGFITQY MHGAERFIAD ADRTKALRDS YGVGYGFGTD MNGFGSWPGP RGADTPNPVQ YPYQSAHGGA VLDRQTTGER TWDINVDGAA HYGLVPDWVE EIRVLGGQAV VDDLLRGAES YLGTWGSTEA HAPGVNLATG SSAAASSTAW KPFTTFVPRK AVDGDPKTRW ASWWSDDQWL RLDLGSPHLI RRVTLDWAGE YATVYRIEVS TDGSVWRTVS STSAGDGGLD TATFAATSAR YVRIHAQDRG TVWGYSLKEV GVHAT
|
| |