| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1500 |
|---|
| Symbol | |
|---|
| ID | 5705478 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 1728907 |
|---|
| End bp | 1729653 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641271008 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001536389 |
|---|
| Protein GI | 159037136 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.508501 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000119415 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTCG GAACGCCGAT TACCGCCCTC TGGCCGACGC CGTCACCGGT GCCCCTCGAC
GACGCCGCAC TCGCCGCCCG CTACGGCCGA ACCGACCGGC CACACCTCCG GGTGAACTTC
GTGACCAGCG TCGACGGCGC GGTCACCGTC GACGGCTACT CGGCCGGGCT CTCCGGCGAG
CCGGACAAGC GGGTCTTCGG CCTGCTGCGG ATGCTCTGCG ACGGCCTCGT GGTCGCCGGC
GGCACGATGC GCCACGAGCG GTACCGACCA ATCCGCCTGG ACGAACGCCG CCGCGCCTGG
CGCCGGGAGC ACGGCCTACC GCAGTACCCG ACCCTCGTCG TGGTCTCCGG CTCCCTCAAC
CTCGACCCGG CCCAGGCCGC GTTCGTCGAC GCACCGGTAC GCCCGGTCGT GCTCACCCAC
GCCGCCGCCA CCGCCCCGCC CGGCCTGGCC GAGGTCGCCG ACGTCGTCGA GTGCGGCGAC
GACCGGGTGG ACCTCACCGC CGGCCTGGCC GAGCTGCGCC GCCGCGGGCT CGGTCAACTG
CTCTGCGAGG GCGGGCCACA CCTGTTCGGC GCGCTCACCG CAGCCGACCT GGTCGACGAG
GTCTGCCTGA CCCTCGCCCC GCTGCTCGCC GGCCCCGGTC CCGGCCGGAT CACCGCCGGT
GGGCCCAGCC CGGTGCGGCA CCTGCCGCTG CGGCACGTGC TCGCCGCCGC CGACGGTGGA
CTGCTGCTCC GCTACACCCG CGACTGA
|
|---|
| Protein sequence | MTVGTPITAL WPTPSPVPLD DAALAARYGR TDRPHLRVNF VTSVDGAVTV DGYSAGLSGE
PDKRVFGLLR MLCDGLVVAG GTMRHERYRP IRLDERRRAW RREHGLPQYP TLVVVSGSLN
LDPAQAAFVD APVRPVVLTH AAATAPPGLA EVADVVECGD DRVDLTAGLA ELRRRGLGQL
LCEGGPHLFG ALTAADLVDE VCLTLAPLLA GPGPGRITAG GPSPVRHLPL RHVLAAADGG
LLLRYTRD
|
|---|
| |