Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1494 |
Symbol | |
ID | 5707499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 1719621 |
End bp | 1720478 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641271002 |
Product | hypothetical protein |
Protein accession | YP_001536383 |
Protein GI | 159037130 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0421] Spermidine synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0134759 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000194556 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGGCGCC GGCGCTCCGC CGACCGGGTG ACCGTCGAGG TGGACACGGG GGTGGCCGAG TTGGTCCCCG ATCCGGACCG GGCCGGCTCC TGGACGCTGC TGCTCGACGG CGCCCCACAG TCGCACGTGG ACCTCGCTGA CCCCACCTAC CTCGAGTTCG AGTACGTGCG TCGGCTCGCC GCCGCGATCG ACCTGCTCGC CCCGGCCGGC GCCCCGCTGC GCCTGCTGCA CCTGGGCGGC GGCGCGCTGA CCCTGCCCCG ATATGTCGCC ACCACCCGTC CCAGCTCGAC CCAACGGGTG TGCGAGGTGG ACGGCGCACT GGTCGAGCTG GTCCGCCAGA AGCTGCCCTG GCCCCCCAAC CCACGACTAC GGGTACGCGT CGCCGACGCC CGGGAAGCCC TCACCGGCCT CCGGGACGCC AGCATCGACA TCGTGGTCGC CGACGTCTTC GCCGGCGCCC GCACCCCGGC CCACCTGACC TCGGTGGAGT TCGCGACCGA AGTGGCCCGC GTGCTCCGAC CCACCGGGTG GTATCTGGCG AACGTCGCCG ACGGTCCGCC GCTGCGGCAC GCCCGGCGGC AGGTCGCCAC CGTCCGGTCG GTGCTACCCA AGGCGACGCT GGTCGGCGAC GCCGCGGTGC TGCGGGGCCG CCGGTACGGC AACCTCGTGC TGCTCGCCGG CCGCACCGCC CCGCCGGTGC CCGAGCTGAC CCGGCGGGTT TCTGGTGACT GGTTCCCGGG TCGGGTGCTC TCCGGCGAGG AGTTGGTCCG CTTCACCGGG GGTGCCCCGG TCGTCCACGA CACCGACGCC ACGGACTCCG CACCACCCCC GCCGGGGATC TTCTCAGTCG GCCGTTGA
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Protein sequence | MGRRRSADRV TVEVDTGVAE LVPDPDRAGS WTLLLDGAPQ SHVDLADPTY LEFEYVRRLA AAIDLLAPAG APLRLLHLGG GALTLPRYVA TTRPSSTQRV CEVDGALVEL VRQKLPWPPN PRLRVRVADA REALTGLRDA SIDIVVADVF AGARTPAHLT SVEFATEVAR VLRPTGWYLA NVADGPPLRH ARRQVATVRS VLPKATLVGD AAVLRGRRYG NLVLLAGRTA PPVPELTRRV SGDWFPGRVL SGEELVRFTG GAPVVHDTDA TDSAPPPPGI FSVGR
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