Gene Sare_1494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1494 
Symbol 
ID5707499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp1719621 
End bp1720478 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content74% 
IMG OID641271002 
Producthypothetical protein 
Protein accessionYP_001536383 
Protein GI159037130 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0421] Spermidine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0134759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000194556 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGGCGCC GGCGCTCCGC CGACCGGGTG ACCGTCGAGG TGGACACGGG GGTGGCCGAG 
TTGGTCCCCG ATCCGGACCG GGCCGGCTCC TGGACGCTGC TGCTCGACGG CGCCCCACAG
TCGCACGTGG ACCTCGCTGA CCCCACCTAC CTCGAGTTCG AGTACGTGCG TCGGCTCGCC
GCCGCGATCG ACCTGCTCGC CCCGGCCGGC GCCCCGCTGC GCCTGCTGCA CCTGGGCGGC
GGCGCGCTGA CCCTGCCCCG ATATGTCGCC ACCACCCGTC CCAGCTCGAC CCAACGGGTG
TGCGAGGTGG ACGGCGCACT GGTCGAGCTG GTCCGCCAGA AGCTGCCCTG GCCCCCCAAC
CCACGACTAC GGGTACGCGT CGCCGACGCC CGGGAAGCCC TCACCGGCCT CCGGGACGCC
AGCATCGACA TCGTGGTCGC CGACGTCTTC GCCGGCGCCC GCACCCCGGC CCACCTGACC
TCGGTGGAGT TCGCGACCGA AGTGGCCCGC GTGCTCCGAC CCACCGGGTG GTATCTGGCG
AACGTCGCCG ACGGTCCGCC GCTGCGGCAC GCCCGGCGGC AGGTCGCCAC CGTCCGGTCG
GTGCTACCCA AGGCGACGCT GGTCGGCGAC GCCGCGGTGC TGCGGGGCCG CCGGTACGGC
AACCTCGTGC TGCTCGCCGG CCGCACCGCC CCGCCGGTGC CCGAGCTGAC CCGGCGGGTT
TCTGGTGACT GGTTCCCGGG TCGGGTGCTC TCCGGCGAGG AGTTGGTCCG CTTCACCGGG
GGTGCCCCGG TCGTCCACGA CACCGACGCC ACGGACTCCG CACCACCCCC GCCGGGGATC
TTCTCAGTCG GCCGTTGA
 
Protein sequence
MGRRRSADRV TVEVDTGVAE LVPDPDRAGS WTLLLDGAPQ SHVDLADPTY LEFEYVRRLA 
AAIDLLAPAG APLRLLHLGG GALTLPRYVA TTRPSSTQRV CEVDGALVEL VRQKLPWPPN
PRLRVRVADA REALTGLRDA SIDIVVADVF AGARTPAHLT SVEFATEVAR VLRPTGWYLA
NVADGPPLRH ARRQVATVRS VLPKATLVGD AAVLRGRRYG NLVLLAGRTA PPVPELTRRV
SGDWFPGRVL SGEELVRFTG GAPVVHDTDA TDSAPPPPGI FSVGR