| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1488 |
|---|
| Symbol | |
|---|
| ID | 5707493 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 1714223 |
|---|
| End bp | 1715791 |
|---|
| Gene Length | 1569 bp |
|---|
| Protein Length | 522 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641270996 |
|---|
| Product | TAP domain-containing protein |
|---|
| Protein accession | YP_001536377 |
|---|
| Protein GI | 159037124 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00026814 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGATTCGCA CTCGCGCCCG CCGTTTCGCC CCGATCGTGC TGCTGGCCGG CACCTTGCTC
GCCGCCGGCT GCACGCTGCC GGCGCTCGCG CCCCGCACCG AGGCCGAGGG CCCGGCGGCT
CCGGGCGCCG CGCCGACCTG GCGGGCATGT CCGGAGGTGG CCAAGGAGTT GGTCGGGTCC
GCCGCGCCGA ACATGCGCTA CGAGTGCACC CAAATCCAGG TTCCCCGCAA CTGGGACGGT
GGCACCGGTG CCACCTCCGG CCCGGGCGTC GGGGAGACGT TCGACATCGC GCTGCTGCGC
GCCCGTTCCA CGAACCAGAA GGCCCGGATC GGCTCGCTGG TGATCAACCC GGGCGGGCCG
GGCGGCTCCG GCGTGGACAC CGCCGTCTAT CTCTCCTTCC CGGAGGCGGT CGGCGGCCTG
CCCGCCTCGG TCACGGAACG CTTCGACATC GTCGGCTTCG ACCCGCGCGG GGTGGCCCGC
TCGAGCCCGG TGGAGTGCAT CTCCAGCGAG AACCTCGACG CCAGCTTCGG CTACGACCCG
GATCCGGAGA GCCAGCAGGC GTTCGACGGC TTCGTCGCGT TGAATCAGCG GATCGGGCGC
GGGTGCGGCG ACCGGTACGG TGACCAGCTG TCGCTGTACG GCACCGAGCA GGCCGCTCAC
GACATGGACG CGATCCGGGC CGCGGTGGGC GACGAGAAGT TGACCTACCT GGGTTACTCG
TACGGCACCC TGCTCGGCGC CACCTACGCC CAGCTCCACC CGCAGCGGGT GCGGGCGCTG
GTGCTCGACG GGGCGGTCGA CCCTCGACTG GACCTGATCG CCAGCTCGGA AAACCAGGCC
AAGGGCTTCG AGCGGGCCTT CGACAACTTC GCCCTGTGGT GTTCCACCAA CGCCGACCGC
TGCCCGATCG CTCCCGCCGC GCGCGACGCG GTCACCTCGG CCATCGACAA GGCGCGGGTC
TCCCCCGCCC GGGGCGACGA TGGCCGGGAG GCCACCCCGG GGTGGGTCTT CTACGCGGTG
GTCTCCTCGC TCTACACCGA GGCCGGCTGG GAGCAGTTGG CCAGGGCGAT CGGCGAGTTG
GAGGGCGGCG ACCCGACAGA GGTGTTCCGC CTCGCCGACG CGTACGCGGG TCGGGAGCCG
GACGGCTCGT ACTCGAACCT GTTCGACGCC AACCTCGCGG TGAACTGCGC CGACGAGGAG
GAGAGGCCGA GCCGGGAGCA GATCCGGCAG CTCCAGTCGC AGTGGCGTGG GACGTACCCG
CTGTTCGGCC CGGCGCTCGC GGTCGGCATG CTCAGCTGCA CCGAGTGGCC CGGCGGGCGG
GATCCGTACC CGACCGGTCG GGCCGACGGG GCGCCGCCGA TCCTGGTGGT CGGCACCACC
GGAGACCCGG CGACACCCTA CGAACAGACC CCGACGCTGG CCGGGATGCT GGGTGTGGGG
CGAGTGCTCA CCTGGGACGG TGAGGGGCAT ACCGCCTACC CGCAAACGGC CTGTATCACC
GCGGCGGTCG ACGCGTACCT GATCGACCTG ACCGTGCCTC CGGACGGGAC ACGCTGCCCG
CCCCAGTGA
|
|---|
| Protein sequence | MIRTRARRFA PIVLLAGTLL AAGCTLPALA PRTEAEGPAA PGAAPTWRAC PEVAKELVGS
AAPNMRYECT QIQVPRNWDG GTGATSGPGV GETFDIALLR ARSTNQKARI GSLVINPGGP
GGSGVDTAVY LSFPEAVGGL PASVTERFDI VGFDPRGVAR SSPVECISSE NLDASFGYDP
DPESQQAFDG FVALNQRIGR GCGDRYGDQL SLYGTEQAAH DMDAIRAAVG DEKLTYLGYS
YGTLLGATYA QLHPQRVRAL VLDGAVDPRL DLIASSENQA KGFERAFDNF ALWCSTNADR
CPIAPAARDA VTSAIDKARV SPARGDDGRE ATPGWVFYAV VSSLYTEAGW EQLARAIGEL
EGGDPTEVFR LADAYAGREP DGSYSNLFDA NLAVNCADEE ERPSREQIRQ LQSQWRGTYP
LFGPALAVGM LSCTEWPGGR DPYPTGRADG APPILVVGTT GDPATPYEQT PTLAGMLGVG
RVLTWDGEGH TAYPQTACIT AAVDAYLIDL TVPPDGTRCP PQ
|
|---|
| |