Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1483 |
Symbol | |
ID | 5706076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 1711282 |
End bp | 1712016 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641270991 |
Product | chitin-binding domain-containing protein |
Protein accession | YP_001536372 |
Protein GI | 159037119 |
COG category | [S] Function unknown |
COG ID | [COG3397] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.815729 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000167974 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGTCGAA GAATCACCCT CCCGCTGGTC ATGGCGGGCG CCGTCGGTTC CGCGCTGGCT GTCGCCGGGC CGGCCCAGGC ACACGGGTAC GTGTCCGGTC CACCCAGCCG TCAGGCGCTC TGCGCCCAAC ACCGGGTACC CGACTGCGGC CAGATCACCT GGGAGCCGCA GAGCGTCGAG GGCCCGAAGG GGCTACGCAG CTGCCACGGG GGAAACGCCC GCTTCGCCGT CCTGAACGAC GACAACTGGG GATGGCCGGC CACCAGCGTC GGTGGCACCG TCACGTTCAC CTGGACCAAC ACCGCCCGAC ACGCCACCCG CGACTGGGAG TACTTCATCG GCGACACCCG AATCGCGGTA TTCGACGGCG GCGGCCAGCA GCCGGGTTCC ACCGTGACGC ACACCGTCGA CCTCGGCGGC CACTCCGGTC GGCAGAAGAT CCTCGCGGTG TGGAACATCG CCGACACCGC CAACGCCTTC TACTCCTGCG TGGACCTTCA GGTAGGTGCC GGTCCCGGCC CCACGCCGAC CCCGTCGACC AGCCCGAGCC CGAGCCCGAC CGGCACACCG ACCACGCCGC CGCCCTCCCC GGGTGGCAGC TGGGCGGCGG GTCGCAGCTA CCAGGTCGGC GACCAGGTGA CCTACGGCGG CGCGACGTAC CGCTGTCGGC AGGCACACAC CGCGCTTCCC GGCTGGGAAC CGCCCCACAC CCCGGCACTG TGGACACAGG TCTGA
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Protein sequence | MRRRITLPLV MAGAVGSALA VAGPAQAHGY VSGPPSRQAL CAQHRVPDCG QITWEPQSVE GPKGLRSCHG GNARFAVLND DNWGWPATSV GGTVTFTWTN TARHATRDWE YFIGDTRIAV FDGGGQQPGS TVTHTVDLGG HSGRQKILAV WNIADTANAF YSCVDLQVGA GPGPTPTPST SPSPSPTGTP TTPPPSPGGS WAAGRSYQVG DQVTYGGATY RCRQAHTALP GWEPPHTPAL WTQV
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