| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1471 |
|---|
| Symbol | |
|---|
| ID | 5704437 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 1700994 |
|---|
| End bp | 1702196 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641270979 |
|---|
| Product | peptidase S1 and S6 chymotrypsin/Hap |
|---|
| Protein accession | YP_001536360 |
|---|
| Protein GI | 159037107 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.284694 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000211937 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACTTCGG GTCACGGGCG GTCCGGGGCG GGGGAGGACT TCGGCGCTAC TCCCGCGGAC
GATACCCGAG ATCGCCCCGG ACCGTGGCCG CCCGCCGTCG ATCGGCCCCC GGTGCAACCG
CCGCCGATCG CTCCGGCGCC GCCCGCCGGT GTCGCTCACG GTACGCCTGA ACCCGCCCGA
CCCACGGTTG CACCGCCCCG AACCACGTGG TCTCCGCCAC CCCAGCCAGG CCCGTCGGAG
GACGCCCCCG CTGCCCCGGT CGCCGCAGCC GTCCCCGGCG TGCCGACGTA CGGCGGCCCC
GGTACGTCCG GTGCCGCCTA TCCGCCGCTT CCCGGGTCGG GTGGCCCGCC GCCGGTCGGG
CCGCCACCTG GCGGCCCGGG CGGGATCTGG CCCGGAGCAG CCCATCCGGT TCCCGTTCGG
GCGCCCCGAC CGCTCGGCCT GCTCGGGTGG GTGGCCGTGC TGGCCATCGG GGCGCTACTC
GTGGTGACCG GCGTCCAGGC GTACCAGATC CACCGGCTCA CTGATCGGCT CGCCGACACC
GACCGGCGGC TGGTTGCCGG GCAGGAGGAC AGCCAGGCCC GGCTCGACGG GCTGGAGGCG
CGGGCGAAGA CCCTGGAGTC AGAGGTCGGC GCCGCGTTCG ACCCGGAAGT CATCGCCGCC
GCCGCACTGC CCAGCGTGTT TCGGGTGCGC GCCGGGCGGT TCACCGGCAG CGCGTTCGCG
GTCGGCGAGT CGACCGCCGG TGGTACCAAT CTGTTCACCA ACTTCCACGT GGTCGAAGGG
GTCTGGGACG ACGGGGACCG GGAGGTCTTC CTGGAGCGCA CCGATCAGCG CTTCCCGGCC
ACCATCGTCG AGGTCGACAA GGACAACGAC ATCGCCCAGC TCCGCACGAC AGGCAAGTTC
ACCGGCCTCA CCGCCGCACC TGGCGAGGTC AAGCCCGGGC AGCAGATCGT CGTCGTCGGT
GCACCCCTGG GCTTGGAGGA CAGCGTCACC ACCGGTGTGG TGAGCGCGTT TCGCGAGGCC
AAGGGTGGTG ACCCGGCAGC GATCCAGTTC GATGCTCCGA TCAACCCCGG CAACTCGGGT
GGTCCGGTGG TCAACGGCGA GCGGCAGGTG GTCGGCATCG CCACCGCCAA GGCGCGTGAC
GCCGAGGGGA TCGGCCTCGC CGTCCCGATC GGCACGGCCT GCGAGGCCTT CGACATCTGC
TGA
|
|---|
| Protein sequence | MTSGHGRSGA GEDFGATPAD DTRDRPGPWP PAVDRPPVQP PPIAPAPPAG VAHGTPEPAR
PTVAPPRTTW SPPPQPGPSE DAPAAPVAAA VPGVPTYGGP GTSGAAYPPL PGSGGPPPVG
PPPGGPGGIW PGAAHPVPVR APRPLGLLGW VAVLAIGALL VVTGVQAYQI HRLTDRLADT
DRRLVAGQED SQARLDGLEA RAKTLESEVG AAFDPEVIAA AALPSVFRVR AGRFTGSAFA
VGESTAGGTN LFTNFHVVEG VWDDGDREVF LERTDQRFPA TIVEVDKDND IAQLRTTGKF
TGLTAAPGEV KPGQQIVVVG APLGLEDSVT TGVVSAFREA KGGDPAAIQF DAPINPGNSG
GPVVNGERQV VGIATAKARD AEGIGLAVPI GTACEAFDIC
|
|---|
| |