Gene Sare_1464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1464 
Symbol 
ID5704430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand- 
Start bp1693088 
End bp1693705 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content68% 
IMG OID641270973 
Producthypothetical protein 
Protein accessionYP_001536354 
Protein GI159037101 
COG category[R] General function prediction only 
COG ID[COG5516] Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones6 
Fosmid unclonability p-value0.00237783 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGGCAC AGGTCCGAGC ACACACATTC CAGCCCCGCG ATCTCGTGGG GGGAGACCTC 
GTACTCGACC TCGTGAACAC CGTGACCACC CGCAACGCGG AGCCGGTCGA CAGGCTCGAC 
GGCTACGCCC GCCTGCTGGA CTGGGCAGAG CTCACCGGGG CCTTCCCCGC GGCAGACCTG 
GCCCAGGTAC TCAACGAAAC CGCGGCCAAC CCACACGCCG CCGAATACGC GCTGACCCAC 
GTCAAAGCGC TGCGGGAAAC CCTCTGGGAA CTACTCACCG CAACTGTCTT CGGACAGACA 
CCGCCTCCGG GAGCGCTCGC GTCGCTGCAA TCCCAGTGGC GAAGGGCGGT CGGGAGTGCC 
TGCCTACAGC CGGTCGACGA GCACATCGCG CCGGTTGTGA CAGTGAAGGC CTCCGGTCTC 
GACTACCTCA CGCACGCCCT TGCCCTGCAC GCGGTACGCC TGCTGGAAGA AGTACCGCCA 
AACCGCCTGC GCGTCTGCGC GGGCCGGCAA TGCGGCTGGT TCTACCTCGA CACGTCGAGA 
GCCGGGCGAC GGCGCTGGTG CGACATGGCG ACCTGCGGAA ACGCCGAGAA GACCCGCCGC 
CACAACGCCC GTCCGTAG
 
Protein sequence
MQAQVRAHTF QPRDLVGGDL VLDLVNTVTT RNAEPVDRLD GYARLLDWAE LTGAFPAADL 
AQVLNETAAN PHAAEYALTH VKALRETLWE LLTATVFGQT PPPGALASLQ SQWRRAVGSA 
CLQPVDEHIA PVVTVKASGL DYLTHALALH AVRLLEEVPP NRLRVCAGRQ CGWFYLDTSR 
AGRRRWCDMA TCGNAEKTRR HNARP