Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1452 |
Symbol | |
ID | 5704163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 1676051 |
End bp | 1678126 |
Gene Length | 2076 bp |
Protein Length | 691 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641270961 |
Product | hypothetical protein |
Protein accession | YP_001536342 |
Protein GI | 159037089 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000394394 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0118097 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCCGAC CCACCTCGCT GCTGAAGCGA CTGCTCGTCG GTCGACCGTT CCGGTCCGAC CGGCTTGCGC ACACCCTGTT GCCCAAGCGC ATCGCCCTGC CCGTCTTCGC CTCCGACGCG CTTTCCAGCG TGGCGTACGC GCCCGACGAG ATCCTGCTGA TGCTCTCGAT CGCCGGGGCC TCGGCGTTCG TGTTCTCGCC GTGGATCGCC CTGGCGGTGG TCGTGGTGAT GCTCGCCGTC GTGGCGAGCT ACCGGCAGAA CGTGTACGCC TACCCGTCCG GCGGCGGCGA CTACGAGGTG GCCACGGTCA ACCTGGGGCG GCGCGCCGGC GTCGGCGTGG CCAGCGCCCT CCTGGTCGAC TACGTGCTGA CCGTCGCCGT GTCGGTCTCG TCCGGGGTGG CGAACCTGGG CGCGGTGATC CCCTTCGTGG CCACCCACAA GGTGGCGGTG GCCGTCGGCG CGGTGGTGCT GCTCGCCGCC GTCAACCTGC GTGGGATCAA GGAGTCCGGC ACCACCTTCG CCATCCCCAC CTACGGCTTC ATGATCGTTA TCATCGGCAT GATCCTCACC GGGCTGGTCC GGGTGGTGCT GCTCGGCCAG GACCTGCGCG CGCCCAGCGC GGATCTGGTC ATCGCCGCCG AGTGGAGCGA CACGACCGGG TGGGCGATGG CGTTCCTGCT GCTTCGCAGC TTCTCCTCCG GCTGTGCCGC GCTCACCGGC GTCGAGGCGA TCTCCAACGG GGTGCCCGCC TTCCGGGCGC CGAAGAGCCG AAACGCGGCG ACCACCCTGT TCATGCTCGG CGTGGTCGCG GTGACCATGC TGGTCGGCAT CGTCTGGCTG GCCCGGCTGA CCGGCCTGCA GTTCGTCGAG GACCCGGCCC GGCAGATCGT CGACGGCCCC GACGGGTACG TGCAGAAGAC GGTCACCGCG CAGCTCGGCG AGACCATCTT CGGCTCCGGG TCGCTACTGC TGTTCGTCGT CGTCGGCGTC ACCGCCCTGA TCCTCTTCCT GGCCGCGAAC ACCGCGTTCA CCGGCTTCCC GGTGCTCGGG TCGATCCTCG CCCAGGACCG CTACCTGCCC CGACAGCTGC ACACGCGGGG AGACCGGCTC GCGTTCTCCA ACGGCATCCT CTTCCTGGCC GGCTTCGCGA TTCTGCTGAT CGTCGGTTTC CAGGCCGAGG TGACCAGGCT GATCCAGCTC TACATCGTCG GCGTCTTCGT CTCGTTCACC CTGTCCCAGG CCGGCATGAT CCGGCACTGG AACCGGTACC TCCAGACCGA GCGGGATCCG CAGGTACGCC GGCGGATGAT CCGCTCCCGG GCGATCAACT CCTTCGGCAT GGCGATGACC GCCACCGTGC TGGTGATCGT GGTGGTCACC AAGTTCCTGC TCGGCGCGTG GATCGCCATC GCCGCGATGG CCATGATCTA CCTGGTGATG CTGGGAATCC GCCGGCACTA CGACCGGGTC GCCGTCGAAC TCACCCCGGA CGAGGGGCGG CCGGTGAAAC CGGCCCGCAA CCACGCGGTC GTGCTGGTCA GCAAGGTGCA CCAGCCGACC CTGCGGGCGC TCGCCTACGC GCAGGCCACC CGGCCGGACA GCCTGACCGC GGTGACGGTG AACGTGGACG ACAAGGACAC CCGCCGGTTG CAGGCCGAGT GGGAGCGGCG GGACGTACCG GTCGCCCTGA CCGTGATCGA CTCGCCGTAC CGGGAGATCA CCCGCCCGAT CCTGAACTAC GTGGCCGGCG TCCGTCGGTC CTCACCCCGC GACGTGGTCA CCGTCTTCAT CCCCGAGTAC GTGGTCGGCC ACTGGTGGGA GAACCTGCTG CACAACCAGA GCGCGCTGCG GCTTAAAGGG CGGCTGTTGT TCGAGCCGGG GGTGATGGTC ACGAGCGTGC CCTGGCAGCT TGCCTCGACC GCCGGCAAGG ACCTGGACCG GCTGGACGAG AACCTCAGCC GGGGACCGGC CCGCGGCCCC CGGGTGACGC CCGGTGGGCC GCCGAGCACC CCGCCAGCGG TCTCCGCCCC GCCGACCAAG ACTGGCCCGG ACCCGTCCGA CGGGAGTGAA CGGTGA
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Protein sequence | MARPTSLLKR LLVGRPFRSD RLAHTLLPKR IALPVFASDA LSSVAYAPDE ILLMLSIAGA SAFVFSPWIA LAVVVVMLAV VASYRQNVYA YPSGGGDYEV ATVNLGRRAG VGVASALLVD YVLTVAVSVS SGVANLGAVI PFVATHKVAV AVGAVVLLAA VNLRGIKESG TTFAIPTYGF MIVIIGMILT GLVRVVLLGQ DLRAPSADLV IAAEWSDTTG WAMAFLLLRS FSSGCAALTG VEAISNGVPA FRAPKSRNAA TTLFMLGVVA VTMLVGIVWL ARLTGLQFVE DPARQIVDGP DGYVQKTVTA QLGETIFGSG SLLLFVVVGV TALILFLAAN TAFTGFPVLG SILAQDRYLP RQLHTRGDRL AFSNGILFLA GFAILLIVGF QAEVTRLIQL YIVGVFVSFT LSQAGMIRHW NRYLQTERDP QVRRRMIRSR AINSFGMAMT ATVLVIVVVT KFLLGAWIAI AAMAMIYLVM LGIRRHYDRV AVELTPDEGR PVKPARNHAV VLVSKVHQPT LRALAYAQAT RPDSLTAVTV NVDDKDTRRL QAEWERRDVP VALTVIDSPY REITRPILNY VAGVRRSSPR DVVTVFIPEY VVGHWWENLL HNQSALRLKG RLLFEPGVMV TSVPWQLAST AGKDLDRLDE NLSRGPARGP RVTPGGPPST PPAVSAPPTK TGPDPSDGSE R
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