Gene Sare_1451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1451 
Symbol 
ID5703358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp1675222 
End bp1675887 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content70% 
IMG OID641270960 
ProductTrkA domain-containing protein 
Protein accessionYP_001536341 
Protein GI159037088 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0437642 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00701703 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCATGTGG TGATCCTGGG CTGTGGGCGG GTCGGGTCGA CCCTCGCGCA CGGCCTGGAG 
GCCCGGGGGC ACTCGGTCGC GGTCATCGAC CAGGATTCCG ACGCCTTCCG CCGGCTCGGC
CCGGACTTCG CCGGGATCAC GGTGACCGGT GCCGGATTCG ACGGGGACGT GCTTCGGCAG
GCCGGCATCG AGCGGGCCGA CGCCTTCGCG GCGGTCTCCA GTGGCGACAA CTCCAACATC
ATCTCCGCCC GGGTGGCCCG GGAGACGTTC GGTGTCACCC GTGTCGCGGC CCGGATCTAC
GACCAGCGGC GGGCCCAGGT CTACGAACGT CTCGGCATCC CGACCGTGGC CACCGTCCGG
TGGACCGCCG ACCGGATGCT GCGGCACCTG GTGCCGGAGG GCAACGAGGC GTTGTTCCGC
GACCCGACGA GCACCGTCTC GATCGTGGAG GTGCCGGTTC ACAAGGACTG GATCGGCCGC
TCGGTACCGA CGCTGGAGCG GGCGACCGGC GCCCGGGTGG CGTACATCAC CCGGTTCGGC
ATCGGCACCC TGCCGACGCT CACCACCGTC GTCCAGGAGG GTGACCAGAT CTTCATGCTG
GTCACCGATG ACATCGTCAA CGCGGTCACA TCGGTGGCGG CGCTGCCGCT GGAAGGGGGG
CAGTGA
 
Protein sequence
MHVVILGCGR VGSTLAHGLE ARGHSVAVID QDSDAFRRLG PDFAGITVTG AGFDGDVLRQ 
AGIERADAFA AVSSGDNSNI ISARVARETF GVTRVAARIY DQRRAQVYER LGIPTVATVR
WTADRMLRHL VPEGNEALFR DPTSTVSIVE VPVHKDWIGR SVPTLERATG ARVAYITRFG
IGTLPTLTTV VQEGDQIFML VTDDIVNAVT SVAALPLEGG Q