Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1451 |
Symbol | |
ID | 5703358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 1675222 |
End bp | 1675887 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641270960 |
Product | TrkA domain-containing protein |
Protein accession | YP_001536341 |
Protein GI | 159037088 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0437642 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00701703 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCATGTGG TGATCCTGGG CTGTGGGCGG GTCGGGTCGA CCCTCGCGCA CGGCCTGGAG GCCCGGGGGC ACTCGGTCGC GGTCATCGAC CAGGATTCCG ACGCCTTCCG CCGGCTCGGC CCGGACTTCG CCGGGATCAC GGTGACCGGT GCCGGATTCG ACGGGGACGT GCTTCGGCAG GCCGGCATCG AGCGGGCCGA CGCCTTCGCG GCGGTCTCCA GTGGCGACAA CTCCAACATC ATCTCCGCCC GGGTGGCCCG GGAGACGTTC GGTGTCACCC GTGTCGCGGC CCGGATCTAC GACCAGCGGC GGGCCCAGGT CTACGAACGT CTCGGCATCC CGACCGTGGC CACCGTCCGG TGGACCGCCG ACCGGATGCT GCGGCACCTG GTGCCGGAGG GCAACGAGGC GTTGTTCCGC GACCCGACGA GCACCGTCTC GATCGTGGAG GTGCCGGTTC ACAAGGACTG GATCGGCCGC TCGGTACCGA CGCTGGAGCG GGCGACCGGC GCCCGGGTGG CGTACATCAC CCGGTTCGGC ATCGGCACCC TGCCGACGCT CACCACCGTC GTCCAGGAGG GTGACCAGAT CTTCATGCTG GTCACCGATG ACATCGTCAA CGCGGTCACA TCGGTGGCGG CGCTGCCGCT GGAAGGGGGG CAGTGA
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Protein sequence | MHVVILGCGR VGSTLAHGLE ARGHSVAVID QDSDAFRRLG PDFAGITVTG AGFDGDVLRQ AGIERADAFA AVSSGDNSNI ISARVARETF GVTRVAARIY DQRRAQVYER LGIPTVATVR WTADRMLRHL VPEGNEALFR DPTSTVSIVE VPVHKDWIGR SVPTLERATG ARVAYITRFG IGTLPTLTTV VQEGDQIFML VTDDIVNAVT SVAALPLEGG Q
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