Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1435 |
Symbol | |
ID | 5708058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 1661518 |
End bp | 1662399 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 641270944 |
Product | ribokinase-like domain-containing protein |
Protein accession | YP_001536325 |
Protein GI | 159037072 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000559808 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGTCGTGG TCGGCGACCT GATCACCGAC GTGGTGGCGG TACTGGCCGG GCCGATCGTG ACCGGGTCGG ACACCCCGGC CGAGATCCGG TTCACCGGCG GCGGCCAGGC GGCGAACACT GCGGCCTGGC TGGGCGCGTT GGGCGTGCCG GTGACGCTGG TCGGCGCGGT GGGCGACGAC GGTCCCGGCC GGGACCGGGT CGCCGAGTTG GAGCGCGGCG GGGTTGACTG CGCGGTCACC CGGGTGCCCG ACGTCCCCAC CGGAACGGTC CTGGTGCTGG CCACCGCCGA CGAACGCACG ATGGTCACCG AGCGGGGGGC GAACCTGTGG CTGTCTCCGG CCGCGGTGGA CGCCGCCCTG GCTGCCGCGC CCGACGCCGG CCACCTGCAC CTGTCCGGTT ACACCCTGTT GGACGCCGGT TCCCGGCCGG CCGGGCTGCA CGCGTTGGCC GCGGCCCGCA GGCGGGGACT CACCATCAGT GTCGACGCGG CCTCCGCGGC ACCGCTGCAA CGGGTGGGGG CGGCGGCCTT CCTGGGCTGG GTACGCGGCA TCGACCTGCT CCTGGTCAAC GCGGCGGAGG CACGGGTGCT GGCGGGCGGG CTCGACCCGG CGGCGCAGGG GCGGGTGCTC TCCGCCTCGG CGCGGTGGGT GGTGGTCAAG CGGGGGGCGG CCGGCGCGGT GTGGGTGGAC CGGGACGCCA TGGTCGCGGT GACGCCGACC CGCCGGATGG CGGTGGTCGA TCCCACCGGG GCCGGCGACG CGTTCGCCGC CGGCCTGCTG TCGACGTGGC TGACCGGGGC GTCCCCCGAG GCGGTGCTAC AGCGGGCGGG TGACCTGGGC GCGTCCGCGG TCGGTCGGGT GGGCGCTCGA CCGCCGGCCT GA
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Protein sequence | MVVVGDLITD VVAVLAGPIV TGSDTPAEIR FTGGGQAANT AAWLGALGVP VTLVGAVGDD GPGRDRVAEL ERGGVDCAVT RVPDVPTGTV LVLATADERT MVTERGANLW LSPAAVDAAL AAAPDAGHLH LSGYTLLDAG SRPAGLHALA AARRRGLTIS VDAASAAPLQ RVGAAAFLGW VRGIDLLLVN AAEARVLAGG LDPAAQGRVL SASARWVVVK RGAAGAVWVD RDAMVAVTPT RRMAVVDPTG AGDAFAAGLL STWLTGASPE AVLQRAGDLG ASAVGRVGAR PPA
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