| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1424 |
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| Symbol | |
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| ID | 5704813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 1647859 |
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| End bp | 1648845 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641270934 |
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| Product | RNA polymerase sigma factor SigB |
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| Protein accession | YP_001536315 |
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| Protein GI | 159037062 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0865315 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000203032 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGGACC ACAGGATGCG CGCCACAAGC GGCACCGACA GCCTGACCGA TCTGGATGCC
ACTGACGAGC GCGGTGTATC CACTGATCTG GTTCGGGCCT ACCTCTACGG CATCGGCAAG
ACGAAGCTGC TGACCGCCGC TCAGGAGGTG GAGCTGTCCC GCCGAATCGA GGCCGGGCTC
TTCGCCGAGG CGAAGTTGGC CGCCTGCACG CCGGTCTCCG CCACGCTCCG GGCCGACCTG
GAACTCGTCG CCGTCGAGGG GCGCGCCGCC AAGGACCACC TGTTGGAGGC GAACCTCCGC
CTGGTGGTCA GCATCGCCAA GCGGTACACC GGCCGTGGGA TGGCCTTCCT CGACCTGATC
CAGGAAGGCA ACCTCGGCCT GATCCGCGCG GTCGAGAAGT TCGACTACAC CAAGGGCTAC
AAGTTCTCCA CCTACGCCAC CTGGTGGATC CGCCAGGCCA TCACCCGCGC CATGGCCGAC
CAGTCCCGCA CCATCCGCAT TCCGGTACAC ATGGTCGAGC AGGTCAACCG GATGGTACGG
ACGCGGCGTG ACCTGTCGGT CTCGCTTGGT CGGGAGCCCA CGGTCACGGA GGTGGCCCGC
GCGTTGGACG TCCCGGAAGT CCAGATCATC GAGCTGATCT CGTACGACCG GGAGCCGGTG
AGCCTGGACC AGGCCGTCGG CGAGGACGGC GAGAGCCCAC TCGGCGACTT CGTCGCGGTG
GTGAACGCGA CGGCCGCGCC CGACAACACC GCCGAGCGAG GCGAGCTGCG TCAGGAGGTA
CGGGGTGTGC TCGCCACCCT GTCCCAGCGG GAACAGGCGG TGATCCGGCT CCGGTTCGGG
CTGGACGACG GGCGACAGCG CACCCTGGAC GAGGTCGGTC GGGAATTCGG CCTCTCCCGG
GAGCGGATCC GCCAGATCGA GAAGGGGACA CTGCGCAAGC TACGCGCCCC GGAGCGGGCG
CAGCGGCTGG CGGCGTACGC CTGCTGA
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| Protein sequence | MMDHRMRATS GTDSLTDLDA TDERGVSTDL VRAYLYGIGK TKLLTAAQEV ELSRRIEAGL
FAEAKLAACT PVSATLRADL ELVAVEGRAA KDHLLEANLR LVVSIAKRYT GRGMAFLDLI
QEGNLGLIRA VEKFDYTKGY KFSTYATWWI RQAITRAMAD QSRTIRIPVH MVEQVNRMVR
TRRDLSVSLG REPTVTEVAR ALDVPEVQII ELISYDREPV SLDQAVGEDG ESPLGDFVAV
VNATAAPDNT AERGELRQEV RGVLATLSQR EQAVIRLRFG LDDGRQRTLD EVGREFGLSR
ERIRQIEKGT LRKLRAPERA QRLAAYAC
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