| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1419 |
|---|
| Symbol | |
|---|
| ID | 5704808 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 1640871 |
|---|
| End bp | 1641788 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641270929 |
|---|
| Product | beta-lactamase |
|---|
| Protein accession | YP_001536310 |
|---|
| Protein GI | 159037057 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG2367] Beta-lactamase class A |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.533278 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0000178355 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTCT CCGGCGTGCT GCGCGAGGCG CGCGAACTAC TCGAGGAGGC GGGGCTGCAC
GGAGCCTTCC TGGTTCGCAA TCTCGACACG GGGGACGAGA TCGGCCTCGA CGCGGACGTC
CCCTATCCGG CGGCGTCGCT GGTGAAGGTG CCGCTGGCGC TCGCTGTGCT GGAACGGGTG
GCGCGCGGAG AGCTCGACCT GGCGACGGCG GTCGACATCG CGCCCGGCCC GATCACCACG
GGCACCACCG GACTGAGCCG ATTTCGCCAC CCCGCCCGGA TCGCCCTGGA CGACCTGCTC
TACCTGAGCA TCGCCATCAG CGACGGGGTC GCCGCCGACG CCCTGTTCGA TCTCACCCCA
CCTGCCGCGG TCGCCGCCGA GCTGCGGCGA CTGCGCATCG AAGGCATCGC CGTACGGCAC
CGGATCAGCG ACCTCACCGA CACTCCGGCG GAACGGCTCC GACCGGATGA GGCGCACCTG
GCTCATGCTC TCGCCATCAG CGCCGCGACC TCCGGAAACG GCCACCCTGT CGCCCAACTC
GACGTCGCCC GCGCCAATGC CGGGTCGGCG CGGGCCTTCG TCGACCTGCT GCACGCCGTC
TGGCGACCCG CGGCGATCGA CGGGGCGACC GCGGCACGGG TACGCGACCT GATGGCAGAC
AACGTGCTCC GGCAACGACT CGCACCCGAC TTCACCTCCG ACGCCTCGCG CTGGTCCTCG
AAGACCGGCA CACTGCTGCA CCTGCGACAC GAGGTGGGGG TGGTGGACCA CGCCGACGGG
CAGTCGTACG CGGTCGCCGC GTTGACCGCC TCCCGCGTGC CTGCCGTCGC GCAGCCGGGC
AGCGAGGCGA CCATGGCGCA TGTCGCGCGG GTGCTGCACG GCTATCTGCG CACGGGCGCC
CCGCCCTGGT GGGGTTAG
|
|---|
| Protein sequence | MSVSGVLREA RELLEEAGLH GAFLVRNLDT GDEIGLDADV PYPAASLVKV PLALAVLERV
ARGELDLATA VDIAPGPITT GTTGLSRFRH PARIALDDLL YLSIAISDGV AADALFDLTP
PAAVAAELRR LRIEGIAVRH RISDLTDTPA ERLRPDEAHL AHALAISAAT SGNGHPVAQL
DVARANAGSA RAFVDLLHAV WRPAAIDGAT AARVRDLMAD NVLRQRLAPD FTSDASRWSS
KTGTLLHLRH EVGVVDHADG QSYAVAALTA SRVPAVAQPG SEATMAHVAR VLHGYLRTGA
PPWWG
|
|---|
| |