Gene Sare_1410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1410 
SymbolnrdR 
ID5707687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand+ 
Start bp1631777 
End bp1632241 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content69% 
IMG OID641270920 
Producttranscriptional regulator NrdR 
Protein accessionYP_001536301 
Protein GI159037048 
COG category[K] Transcription 
COG ID[COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 
TIGRFAM ID[TIGR00244] transcriptional regulator NrdR 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0529777 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones2 
Fosmid unclonability p-value0.0000016727 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCGGTGTC CGTACTGCCG GCACCCCGAC TCCCGGGTGG TCGACTCGCG GGAGGCCGAC 
GACGGTCAGT TGATCCGTCG CCGGCGGTCC TGCCCGGAGT GCGGCAAACG GTTCACCACG 
GTCGAGGAGG CGGTCCTCGC GGTCGTCAAG CGCAGTGGGG TCACCGAGCC CTTCAGCCGG 
ACCAAGATCA TTGGTGGGGT GCGCAAGGCG TGCCAGGGCC GACCCGTCGA CGACGACTCC 
ATCGCTCTGC TGGCGCAGAA GGTCGAGGAG ACCGTGCGGG CCAAGGGAGC CGCCGAGCTT 
CCCAGCCACG AGGTCGGGCT GGCCATCCTG GGCCCGTTGC GGGACCTCGA TGAGGTGGCC 
TACCTCCGGT TCGCCAGCGT CTACCGGTCG TTCGAGTCGC TCGCCGACTT CGAGCGGGAG 
ATCGAGACGT TGCGGACTGC GGCACAGACC CGAGGGGGAG GCTGA
 
Protein sequence
MRCPYCRHPD SRVVDSREAD DGQLIRRRRS CPECGKRFTT VEEAVLAVVK RSGVTEPFSR 
TKIIGGVRKA CQGRPVDDDS IALLAQKVEE TVRAKGAAEL PSHEVGLAIL GPLRDLDEVA 
YLRFASVYRS FESLADFERE IETLRTAAQT RGGG