| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1406 |
|---|
| Symbol | |
|---|
| ID | 5704092 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 1625388 |
|---|
| End bp | 1626860 |
|---|
| Gene Length | 1473 bp |
|---|
| Protein Length | 490 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641270916 |
|---|
| Product | malate dehydrogenase |
|---|
| Protein accession | YP_001536297 |
|---|
| Protein GI | 159037044 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0281] Malic enzyme |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0000179901 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGCCATCA CCCGACTGCC GAGTGCCGGA TTCTCGATCA CGATCCGGAT CGCAGTACCC
GCGGACGCCA CCTCGATCGG ACGGTTGACC ACCTCGGTCG GCGAGGCCGG GGCCATCGTC
ACCGCGCTCG ACGTCGTCGA CTCCGACCAT ACCCACGTCG TCGTCGATCT GACCTGCGAC
ACCGCCGACG CCAGTCACGC CGACCAAGTG GTCGACGCGC TCACCTCGCT CGACGGCGTG
GACGTGCGCA AGGTCTCCGA CCGCACGTTC CTGCTGCACC TCGGTGGCAA GATCGAAGTG
ACCCCGAAGG TCTCGCTGCG CACCCGCGAC GAGCTGTCCC GCGCCTACAC CCCGGGGGTC
GCCCGGGTCT GCCAGGCCAT CGCGGAAAAT CCGGCGGACG CGCGGCGGCT GACCATCAAA
CGCAACACGG TGGCGGTGGT CAGCGACGGC TCCGCCGTAC TCGGCCTGGG CAATCTCGGC
CCGGCGGCGT CGCTGCCGGT GATGGAGGGC AAGGCGGCGC TGTTCAAGCG CTTCGGCGGG
GTGGACGCCT GGCCGGTGGT GCTGGACACC CAGGACACCG ACGAGATCGT GGCGATCGTC
AAGGCCATCG CACCCGCGTA CGGCGGGATC AACCTGGAGG ACATCGCCGC GCCGCGCTGC
TTCGAGATCG AGGCACGACT GCGTGCGGCA CTGGACATCC CGGTCTTCCA CGACGATCAG
CACGGCACGG CGATCTGTGT GCTCGCCGCG CTGACCAACG CGCTCCGTGT CGTCGGCAAG
CAGCTGGCCG ATGTGCGGGT GGTGGTCTCC GGCGCGGGCG CCGCCGGCAC CGCAATCATG
AAACTGCTGC TGCGCCAGGG CGTGGGCGAC ATCATCGCGT ACGACCGGCA GGGCGCGCTG
CACCGCGGGA TGGCCGCGCT GAACCCGGCC TGGCAGTGGC TGGCCGAGCA CACGAATCGG
CAGAACTACT CCGGCGACCT GGCCGGGGCG GTACGCGACG CGGACGTCTT CATCGGCGTG
AGCGCCCCCA ACCTGCTCAC CGGTGACGAC GTCGCCGCCA TGGCCAAGGA CTCGATCGTG
TTCGCGCTGG CCAACCCCGA CCCTGAGGTC GACCCACGGG AGGCGCGCAA GCACGCCGCC
GTGGTCGCCA CCGGCCGCTC CGACCAACCC AACCAGATCA ACAACGTGCT GGCATTCCCC
GGTGTGTTCC GGGGAATGCT CGACGCGCAC GCGGAGGGGT TCACGGAGGA GATGGCGATC
GCCGCGGCCC GGGCCATCGC CGACGTCGTC GGCGAGGACA AAATCAACCC GACGGTCATT
GTCCCCAGCG TCTTCGACTC CCGAGTCGCC CCAGCCGTCG CCGCGGCGGT TCGTGCCGCC
GCGCAGAACC CGTCGACCAC CCCGCCGCCA GCCGCCGATC CCGGCCCGAC CGACCTGCCC
GAGATCGCCG CCAGTGCGAG CGCCACCCCC TAG
|
|---|
| Protein sequence | MAITRLPSAG FSITIRIAVP ADATSIGRLT TSVGEAGAIV TALDVVDSDH THVVVDLTCD
TADASHADQV VDALTSLDGV DVRKVSDRTF LLHLGGKIEV TPKVSLRTRD ELSRAYTPGV
ARVCQAIAEN PADARRLTIK RNTVAVVSDG SAVLGLGNLG PAASLPVMEG KAALFKRFGG
VDAWPVVLDT QDTDEIVAIV KAIAPAYGGI NLEDIAAPRC FEIEARLRAA LDIPVFHDDQ
HGTAICVLAA LTNALRVVGK QLADVRVVVS GAGAAGTAIM KLLLRQGVGD IIAYDRQGAL
HRGMAALNPA WQWLAEHTNR QNYSGDLAGA VRDADVFIGV SAPNLLTGDD VAAMAKDSIV
FALANPDPEV DPREARKHAA VVATGRSDQP NQINNVLAFP GVFRGMLDAH AEGFTEEMAI
AAARAIADVV GEDKINPTVI VPSVFDSRVA PAVAAAVRAA AQNPSTTPPP AADPGPTDLP
EIAASASATP
|
|---|
| |