| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1405 |
|---|
| Symbol | |
|---|
| ID | 5704091 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 1622740 |
|---|
| End bp | 1624773 |
|---|
| Gene Length | 2034 bp |
|---|
| Protein Length | 677 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641270915 |
|---|
| Product | Bilirubin oxidase |
|---|
| Protein accession | YP_001536296 |
|---|
| Protein GI | 159037043 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2132] Putative multicopper oxidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000104359 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAACC GGCGACAACT GTTGATGGCA GGCGCCGCCG CCGGGGGAGC GGCCGTCCTG
CTGTCTCCGC CCGGCTCCAG CGCGGTGTCG TTGCCACTGG AGCGTCCGCT GTTGACGCCC
AACGTCATCG AGAAGTACCG GACGGAACTG TTGGTACCGG CGGTCATGCC GCCGGCGCAC
CGACACGGAC GGGACCGGGG CGACGAGTAC GTGATCGGGA TGCGGCAGTT CGCACAGCAG
ATCCTGCCGC CGGATCTCCC CCGAACCACG GTGTGGGGAT TCGGCGCCGC CACGCGCCGG
GGCACGTTCC AGTTTCCGGG GTTCACCATC GAGGCCCGCG TCGACCGTCC CGTGCAAGTG
ACCTGGATCA ACCAACTCGT CGACCGACAC GACCGGTTCC TGCCGCCGCT GTTGCCCGTC
GACCCGACGC TGCTCTGGGC CAACCCGCCT GGGGGAATTG CCGGGCGGGA CTCCACTCCC
ACCTTCACTC GGACCCCCGG CCCGTACCTC GGCCCGGTGC CGGTCGTCGT CCACCTGCAT
GGGGGACACA CCCAGGCGGA GAGTGACGGC TATCCGGAGG CGTGGTACCT GCCAGCGGCG
AAGAACATTC CGGCTGGCTA CGCGACGGTC GGCAGCTTCT ACGATCGGTA TCGGGCGTCG
TTCGCCGAAC AGTTCGGGAT CCAGTGGCGG CCCGGGACCG CAACGTATCG CTACGAGAAC
GACCAACGGG CAGCCACCCT GTGGTACCAC GACCACGCGT TGGGAATGAC CCGTCAGGCG
ATCTACTCCG GACTGGCCGG CTTCTACCTG ATTCGTGGCG GAGAGTTCGA CCTGCCGCCA
GGTGTCCTAC CCGGCCCGGC CCCCGCCCTG GGTGACCCGC CGGGCACCCG CTACTACGAG
ATCCCGATCG TCATCCAGGA TCGCTCGTTC GAGCGGGATG GTTCACTGTT CTATCCCAGC
AGCCGGGCCT TCAGCGGTAC GTGCACCAAT CCCGCAGACT ACATTCCCAA TGGGGACGTC
CCACCGATCT GGGTTCCCGA GTTCTTCGCC GACACCATGG TCGCCAATGG TCGGACGTGG
CCACGCCTCG AGGTCGAACA ACGACGGTAC CGGCTGCGCC TGCTCAACGG CTGCAACACG
CGCACCCTGA TCCTGACGAT CGCTGCCAAC CCCACCGCCG AACGTCCTGT CGACCCAGCC
CTGCCGATCT GGTTGATCGG CACCGATGGC GGCTTTCTTT CCCAACCCCA ACCACTCGAC
AGGATCATCC TCGGCACCTC CCAACGCGTC GACATCATTC TCGACTTCAC CGACGTGCCC
ACCGGCACCG ACCTGTATCT GATCAACGAA GGCCCGGACG GTCCGTTCCT CGGCGGCGTA
CCGGGTGTCG ACTTTGCACC CGCCGATGTC AACACCACCG GTCAGGTCAT GAAGCTGGCC
GTCGTACCGC GCACCGGACC GGATACGAGC GTTCCGCCGG ACCAACTCCG CCTACCCGAG
TTCATCCCGC TCGGCCCAGC GACCAACACC CGTCGGCTGT CGCTCGACGA GCGGAGGTCT
ACCACGAGTT GCGGCGTCAA CGGCATCTTC CTCGGTATCG TCGACCCCGA CGGGACTGCC
GTGCCGCTGA ATTGGGACGA CCCGGTCACC GAGAATGTCG CGCTCAACGC CACCGAGATC
TGGGAGCTCG ACAACCGCAC GGACCATGCT CACCCGATCC ACGTTCACCA GGTCGAATTT
CAGATCATCG GCCGAGGCCC AGAAGGCAAC AAGCCACCTA CCAGGCAGCA ACTCGGCTAT
CACGACACCG TCCTCGCCCT CCCCGGCGAG ATCACTCGAA TCAAATCCTT CTTCGACCTA
CCGGGCCGAT ACATCTGGCA CTGCCACATC CTGGAGCACG AAGACCACGA GATGATGCGG
CCGATCAACA TCGGCCCCGC GACGGACCCA ACCCACGCCG CGACCACAAC CACGCCCACC
AGCGAGAGCC GGCATCCAAG CGACTCACCC GATCACAGAC ACGACCAACG GTAG
|
|---|
| Protein sequence | MVNRRQLLMA GAAAGGAAVL LSPPGSSAVS LPLERPLLTP NVIEKYRTEL LVPAVMPPAH
RHGRDRGDEY VIGMRQFAQQ ILPPDLPRTT VWGFGAATRR GTFQFPGFTI EARVDRPVQV
TWINQLVDRH DRFLPPLLPV DPTLLWANPP GGIAGRDSTP TFTRTPGPYL GPVPVVVHLH
GGHTQAESDG YPEAWYLPAA KNIPAGYATV GSFYDRYRAS FAEQFGIQWR PGTATYRYEN
DQRAATLWYH DHALGMTRQA IYSGLAGFYL IRGGEFDLPP GVLPGPAPAL GDPPGTRYYE
IPIVIQDRSF ERDGSLFYPS SRAFSGTCTN PADYIPNGDV PPIWVPEFFA DTMVANGRTW
PRLEVEQRRY RLRLLNGCNT RTLILTIAAN PTAERPVDPA LPIWLIGTDG GFLSQPQPLD
RIILGTSQRV DIILDFTDVP TGTDLYLINE GPDGPFLGGV PGVDFAPADV NTTGQVMKLA
VVPRTGPDTS VPPDQLRLPE FIPLGPATNT RRLSLDERRS TTSCGVNGIF LGIVDPDGTA
VPLNWDDPVT ENVALNATEI WELDNRTDHA HPIHVHQVEF QIIGRGPEGN KPPTRQQLGY
HDTVLALPGE ITRIKSFFDL PGRYIWHCHI LEHEDHEMMR PINIGPATDP THAATTTTPT
SESRHPSDSP DHRHDQR
|
|---|
| |