Gene Sare_1395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1395 
Symbol 
ID5703754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp1611225 
End bp1611980 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content68% 
IMG OID641270905 
ProductABC transporter related 
Protein accessionYP_001536286 
Protein GI159037033 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0140541 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGACG TGACGACGGG CGAACCGCTC ATCGTGCTGG AATCGGTCAA CAAATGGTTC 
GGACCGCTGC ACGTGCTGGA CAACGTCTCG CTGTCGGTCG GGCGCGGCGA GGTCGTCGTG
GTGATCGGGC CATCCGGCTC CGGTAAATCG ACGCTCTGCC GCACCATCAA CCGGCTGGAG
CCGATCACCT CCGGCAGCAT CACCTTCGAC GGCCGGCCGC TGCCGGCTGA GGGCCGGGCC
CTGGCCAAGC TGCGCAGCGA GGTCGGGATG GTGTTCCAGT CGTTCAACCT CTTCGCGCAC
AAGACGATCC TGGAGAACGT AACCCTCGGC CCGGTCAAGG TCCGCCGGGA GAAGTCGGCG
GCAGCCCGGG AACGCGGCCT CGCCCTGCTG GACCGGGTCG GCATCGCCAA CCAGGCCGAC
AAGTTCCCCG CCCAGCTCTC CGGCGGCCAG CAACAGCGGG CGGCGATCGC CCGGGCGTTG
GCGATGCAGC CCAAGGCGAT GCTCTTCGAC GAGCCGACCA GCGCCCTCGA CCCGGAGATG
GTCGGCGAGG TGCTGGACGT GATGACGTCC CTGGCCCGCG AGGGCATGAC GATGGTCGTC
GTCACCCACG AGATGGGCTT CGCCCGACAC GCGGCCAACC GGGTGGTCTT CATGGCCGAC
GGGCAACTCG TCGAGGACGC GCCCCCGACG GAGTTCTTCG CCAACCCGCG TAGCGAGCGG
GCCAAGGACT TTCTGTCCAA GATCCTCACG CACTAG
 
Protein sequence
MDDVTTGEPL IVLESVNKWF GPLHVLDNVS LSVGRGEVVV VIGPSGSGKS TLCRTINRLE 
PITSGSITFD GRPLPAEGRA LAKLRSEVGM VFQSFNLFAH KTILENVTLG PVKVRREKSA
AARERGLALL DRVGIANQAD KFPAQLSGGQ QQRAAIARAL AMQPKAMLFD EPTSALDPEM
VGEVLDVMTS LAREGMTMVV VTHEMGFARH AANRVVFMAD GQLVEDAPPT EFFANPRSER
AKDFLSKILT H