Gene Sare_1389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1389 
SymbolrecA 
ID5703748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp1604341 
End bp1605387 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content68% 
IMG OID641270899 
Productrecombinase A 
Protein accessionYP_001536280 
Protein GI159037027 
COG category[L] Replication, recombination and repair 
COG ID[COG0468] RecA/RadA recombinase 
TIGRFAM ID[TIGR02012] protein RecA 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.384565 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0556082 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCAG TGCCTGATCG GGAGAGGGCA CTCGACCTTG CTCTCGCTCA GATCGACAAA 
CAGTTCGGCA AGGGCTCGGT GATGCGGCTG GGGGAGCGCC CGGTCGTGCA GACCGCGGTG
GTCCCGACCG GGTCCATCGC GCTGGATGTG GCCCTCGGGG TGGGCGGCCT GCCCCGGGGT
CGGGTCATCG AGGTCTACGG CCCGGAGAGC AGCGGTAAGA CGACGGTGGC GCTGCACGCG
GTGGCCAACG CCCAGCGTGC CGGCGGTATC GCCGCCTTCG TCGACGCCGA ACACGCGCTC
GACCCGGAAT ACGCGAGGGC CCTCGGCGTT GACACCGACG CGCTGCTGGT CTCCCAACCT
GACACCGGTG AGCAGGCCCT GGAGATCGCG GACATGCTGG TCCGCTCCGG CGCGCTCGAC
ATCATCATCA TCGACTCGGT GGCCGCGTTG GTGCCCCGCG CCGAGATCGA GGGGGAGATG
GGCGACAGCC ACGTGGGTCT CCAGGCCCGG CTGATGAGCC AGGCCCTGCG CAAGATGACC
GGTGTGCTCA GCAACACCGG CACGACGGCG ATCTTCATCA ACCAGCTCCG CGAGAAGATC
GGCGTCATGT TCGGCAGCCC TGAGACCACC ACCGGTGGGC GGGCACTGAA GTTCTACGCC
TCGGTCCGGC TCGATGTGCG TCGCATCGAG AGCCTCAAGG ACGGCACCGA CGTGGTCGGT
AACCGCACCC GGGTCAAGGT CGTGAAGAAC AAGGTGGCCG CGCCGTTCAA GCAGGCCGAG
TTCGACATCA TGTACGGCAA GGGCATCTCC CGCGAGGGGT CGCTGATCGA CGTTGGCGTC
GAGCAGGCGA TCATCCGGAA GTCCGGCGCG TGGTACACCT ACGAGGGCGA CCAGCTCGGC
CAGGGCAAGG AGAAGGCCCG CGAGTTCCTT CGGGAGAACC CGGACGTGGC CGCCGAGATC
GAGAAGAAGA TCCTGGAGAA GCTCGGCGTC GGCGCCGGCG CGGGTGACGC CACCGGCGGT
CCGGAGTTGC CGCCGGTCGA CTTCTGA
 
Protein sequence
MAAVPDRERA LDLALAQIDK QFGKGSVMRL GERPVVQTAV VPTGSIALDV ALGVGGLPRG 
RVIEVYGPES SGKTTVALHA VANAQRAGGI AAFVDAEHAL DPEYARALGV DTDALLVSQP
DTGEQALEIA DMLVRSGALD IIIIDSVAAL VPRAEIEGEM GDSHVGLQAR LMSQALRKMT
GVLSNTGTTA IFINQLREKI GVMFGSPETT TGGRALKFYA SVRLDVRRIE SLKDGTDVVG
NRTRVKVVKN KVAAPFKQAE FDIMYGKGIS REGSLIDVGV EQAIIRKSGA WYTYEGDQLG
QGKEKAREFL RENPDVAAEI EKKILEKLGV GAGAGDATGG PELPPVDF