| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1387 |
|---|
| Symbol | |
|---|
| ID | 5703746 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 1602609 |
|---|
| End bp | 1603955 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641270897 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001536278 |
|---|
| Protein GI | 159037025 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0788229 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCACCG ACCTGACCGC GTCGGCCCGG GTTCGCCCGG ACGTGGCGCC GATCCAGCGA
CGGACCCTGA GTCTGTTGTT CGGCACCCAG ATCATCGGCG GTATCGGCGT CACCATCGGC
GTCGCGGTCG GGGCGCTGCT CGCCGCACGG ATCGCCGGCA CCGCGGTCGC CGGACTGACC
CAGAGCGCCG CCGTGGTGGG CGCCGCGCTG CTCGCCATCC CGATCACCCG GATCACGAAC
GGGCACGGGC GCCGCCCGGG GCTGGCTGTC GCCTATCTGG TCGGTGCGAT CGGCGCGGTG
CTGGTGGTGT TCGCCGCGGC CACCCGTTCC GTGCCGCTGC TCCTGCTCGG CAGTCTGCTG
TTCGGGGGTG GCGCCGCGGC GAACCTCCAG GCCCGGTACG CCGCGGTGGA CCTCGCCGAG
CCGGCCCGCA GAGGCCGGCA GCTCGCCCTG ATCGTCTGGG CCACCACCAT CGGTGCGGTG
GCCGCGCCGA ATTTCGCGGC GCTCGCCGAC ACGGTCACCG ACGGGTGGGG GCTGCCGCCG
CTGGCCGGTC CGTACGCCTT CAGCGCCGCC GCTTTCGTGC TGGCCGCCGG CGTACTCCTC
GCGCTGCTGC GGCCCGACCC GTTGCTCACC GCGCGCCGAC TGGAGGCGAC CGACACCGCG
GTCGCTTCGC CGCCCCCGAC GACCGAACCT CCGGCCGGCG GACTCACGGT GGCCCCGACG
TCGGTGGCCC GCCGTGGCGC AGGGATGCGG GCCGCCTGGC AGGTGGTACG CGACCGCCCG
CCGGCCCGGC TCGGCGTCGC GGCGGTGGCG GTGGGACACG CGGTGATGGT GGCGGTGATG
TCGATGACTC CGGTGCGGCT CGGCGAGTCA CACGGCGACG CGGACGTCCT CCGGGTGGTC
GGGATCGTGC TGAGCCTGCA CATCGCCGGC ATGTACGCGC TGGCCCCGCT GGTGGGCTGG
CTCGCCGACC GGCTCGGCCG GCGAGCGGTC ATCCTCGGCG GCGTCGCGCT GTTGCTCGCC
GCGTGCGCCA TCGCCGGCAC TGCCGACCAC CACACACCGC AGCTCACGGT GGGTCTCGTC
CTGCTCGGGC TGGGCTGGTC CGGCACGATG GTGGGCGGCT CCACGCTGCT GTCGGAGTCG
GTGCCGGCGA CGGTGCGACC CAGCGTGCAG GGGTTCTCCG ACCTGACCAT GGGACTGGCC
GGCGCCAGCG CCGCCGCGAT CAGCGGGTTC GTCATGCGGG CGGCCGGCTA TCCGGTGCTC
ACCCTGCTGG CGGCGATCGT GGCGGTTCCG CTGGTGGCGC TAGCGTTACG TCGGGGGCCC
GTCGGGGCGC CCGACCGGGA GGATTGA
|
|---|
| Protein sequence | MTTDLTASAR VRPDVAPIQR RTLSLLFGTQ IIGGIGVTIG VAVGALLAAR IAGTAVAGLT
QSAAVVGAAL LAIPITRITN GHGRRPGLAV AYLVGAIGAV LVVFAAATRS VPLLLLGSLL
FGGGAAANLQ ARYAAVDLAE PARRGRQLAL IVWATTIGAV AAPNFAALAD TVTDGWGLPP
LAGPYAFSAA AFVLAAGVLL ALLRPDPLLT ARRLEATDTA VASPPPTTEP PAGGLTVAPT
SVARRGAGMR AAWQVVRDRP PARLGVAAVA VGHAVMVAVM SMTPVRLGES HGDADVLRVV
GIVLSLHIAG MYALAPLVGW LADRLGRRAV ILGGVALLLA ACAIAGTADH HTPQLTVGLV
LLGLGWSGTM VGGSTLLSES VPATVRPSVQ GFSDLTMGLA GASAAAISGF VMRAAGYPVL
TLLAAIVAVP LVALALRRGP VGAPDRED
|
|---|
| |