Gene Sare_1384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1384 
Symbol 
ID5707303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp1598342 
End bp1599100 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content72% 
IMG OID641270894 
Producttwo component transcriptional regulator 
Protein accessionYP_001536275 
Protein GI159037022 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00801111 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0620226 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGAC CGACAGGGCG TTCCGCCCGG CAACCACGGC CGGGGCCGAC CGCCGAGCTC 
AGCTCGGTCT GGCGGGCCCG CGTGCTGGTG GTCGACGACG AGCCGGCACT GGCCGAGCTG
CTGCTGCGAA CGTTACGGGT CGCCGGGTTC GACGCCCGGT CCGCCGGGTC CCGGGCCGAG
GCGCTGGTGG TGGCCGGTGA GTTGGCTCCG GAGTTGGCGA TCGTGGACGT GATGCTGCCC
GACGGCTCCG GCTTCGACCT GGCCCACGAC CTGCGCCGCC CGCTCCCGGA CCTCGCGGTG
GTCTTCCTGA CGGCGAGGGA CTCGCTGGAG GACCGACTCA CCGGGCTGAA CCTCGGTGGC
GACGACTACA TCACCAAGCC GTTCAGCGTG GCCGAGGTGG TCGCCCGGGT GAACGCGGTG
CTGCGCCGTC TCGGCGGCCG GCCTGATGCC TCCCACCGGC TCACCCTCGC CGACCTGGTA
CTCGACGAGG ACGCGCACAC CGTCACCCGG GCGGGCGTAG CGGTCGAGCT GTCGCCGACC
GAGTTCCGGC TGCTGCGGCA TCTGCTGGAG AACGCCGGTC GGGTGTTGTC CAAGCAGCAG
ATCCTCGCCC AGGTCTGGCA GTACGACTTC CCCGGCGACC CGGGGGTGGT GGAGAAGTTC
GTCAGCCAGC TCCGCCGCAA GATCGACGCA TCGGGCCCGC CGTTGCTGCA CACGGTGCGG
GGCTTCGGCT ACGTCCTGCG GGAACCACGG CCCGAATGA
 
Protein sequence
MARPTGRSAR QPRPGPTAEL SSVWRARVLV VDDEPALAEL LLRTLRVAGF DARSAGSRAE 
ALVVAGELAP ELAIVDVMLP DGSGFDLAHD LRRPLPDLAV VFLTARDSLE DRLTGLNLGG
DDYITKPFSV AEVVARVNAV LRRLGGRPDA SHRLTLADLV LDEDAHTVTR AGVAVELSPT
EFRLLRHLLE NAGRVLSKQQ ILAQVWQYDF PGDPGVVEKF VSQLRRKIDA SGPPLLHTVR
GFGYVLREPR PE