Gene Sare_1383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1383 
Symbol 
ID5707302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp1596930 
End bp1598345 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content72% 
IMG OID641270893 
Producthistidine kinase 
Protein accessionYP_001536274 
Protein GI159037021 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.141813 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0864721 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCGGC CGGCCGTTCG GAGCCTGCGC GGCAGGCTGC TGGTGGGCAC GGTCGCGCTG 
CTGGTGGTCG GGTTGCTGGC CGCCGACATC AGCGCCTATC TGGCGCTGCG CCGGTTCCTC
AGCGAACGGG TCGACAACAC CATCGAGCTG GTCCTCGACC GGGGCTTGGC GCGCGCCCGC
CTCGCCGGGC AGGTCATGCC CGGCGCCGGC GTGGAACAAC TCGTGCCCGC AAACGCCTAT
GTGGCCCTCT ACGACTCCGA GGGCCAGCTG GTGCTGGCCC GGCTGCCGCT GCAGCACGGT
GACACGCGGC CACCGACGGT ACCGCCGATC AGCGCGCTGC CGGCGCACCC GGTGACGATC
GGTGATGATC CGGACACGGC GCTGCGGGTG CGGCGCGAGC TGCTTCCCCC GGAGCAGGCC
CTCCCAGTGG AAATCAACGG TCAGGTTCAC CCGGTGACGG GGCTGGTCGT CGGGGTGACC
CTGGCAGACA ACGCGGCGAC GCTGCGCCGG CTGGTCCTGG TCCAGGCGGT CGCGGGACTG
CTCATCGTCG TCCTGGGGGT GGCGCTGGCC CAGCTGGTGC TCAACAACGG TCTACGACCA
TTGCGTGCCG TCGCGGACAC CGCCCGCGAG ATCGGCCGCG GCAACCTACG CCAACGCGTC
CCCGTGGGCG ACCCACGCAC CGAGATCGGC ACAGTTGCCA CCGCACTGAA CGAGGCGTTC
GACCAGCGTG AACGCAGCGA GGCGCTGACC CGGACGTTCG TCGCCGACGC TTCGCACGAG
CTGCGTACCC CGCTCAGCGC GGTGCACGGA TGGGCCGACC TCTATCTCAA TGACGGAATC
ACCGACTGGG ACGGGGTGGA CGAGGCGATG CGCCGGATCC GCACCGAGAC CACCCGGATG
GGCGCCCTCG TCGAGCAGCT GCTCACCCTG GCCCGGCTGG ACGCGCACCA ACCGCTGGCA
CGCGACGAGG TCGACCTGGG CCGGGTCTGC GCGGACGTGC TGGACAGTCT GCGGGTCACC
GCTGCCCATC ATCGACTCAC GCTCGCCGTG GACGAACGGG TGACCGTCAC CGGCGACGCG
GCCGCGCTCC GCCAGGTGGT GCAGAACCTG GTCGGCAACG CGGTTCGGCA CACCCCGCCT
GGCACGCCGG TCGAGGTGCG CGTCCACCGC GACGACGACG AGGATGCCGT TCTCGTCGTT
CACGACGAGG GGCCCGGGCT CGACGCCGAG GGGCTCGCGC ACGCCTTCGA CCGGTTCTGG
CGCGCCGACC CCGGGCGGGC GGCACCCGGC GGCACCGGGT TGGGCCTGGC CATTGTCCGA
GACATCGTCG GTGCGCATGG CGGCACCGTG GCGCTGGACT CGGCACCCGG GCAGGGACTG
ACGGTCACCG TACGACTGCC AGTCGTTGCT GCGTAA
 
Protein sequence
MRRPAVRSLR GRLLVGTVAL LVVGLLAADI SAYLALRRFL SERVDNTIEL VLDRGLARAR 
LAGQVMPGAG VEQLVPANAY VALYDSEGQL VLARLPLQHG DTRPPTVPPI SALPAHPVTI
GDDPDTALRV RRELLPPEQA LPVEINGQVH PVTGLVVGVT LADNAATLRR LVLVQAVAGL
LIVVLGVALA QLVLNNGLRP LRAVADTARE IGRGNLRQRV PVGDPRTEIG TVATALNEAF
DQRERSEALT RTFVADASHE LRTPLSAVHG WADLYLNDGI TDWDGVDEAM RRIRTETTRM
GALVEQLLTL ARLDAHQPLA RDEVDLGRVC ADVLDSLRVT AAHHRLTLAV DERVTVTGDA
AALRQVVQNL VGNAVRHTPP GTPVEVRVHR DDDEDAVLVV HDEGPGLDAE GLAHAFDRFW
RADPGRAAPG GTGLGLAIVR DIVGAHGGTV ALDSAPGQGL TVTVRLPVVA A