Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1383 |
Symbol | |
ID | 5707302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 1596930 |
End bp | 1598345 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641270893 |
Product | histidine kinase |
Protein accession | YP_001536274 |
Protein GI | 159037021 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.141813 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0864721 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGGCGGC CGGCCGTTCG GAGCCTGCGC GGCAGGCTGC TGGTGGGCAC GGTCGCGCTG CTGGTGGTCG GGTTGCTGGC CGCCGACATC AGCGCCTATC TGGCGCTGCG CCGGTTCCTC AGCGAACGGG TCGACAACAC CATCGAGCTG GTCCTCGACC GGGGCTTGGC GCGCGCCCGC CTCGCCGGGC AGGTCATGCC CGGCGCCGGC GTGGAACAAC TCGTGCCCGC AAACGCCTAT GTGGCCCTCT ACGACTCCGA GGGCCAGCTG GTGCTGGCCC GGCTGCCGCT GCAGCACGGT GACACGCGGC CACCGACGGT ACCGCCGATC AGCGCGCTGC CGGCGCACCC GGTGACGATC GGTGATGATC CGGACACGGC GCTGCGGGTG CGGCGCGAGC TGCTTCCCCC GGAGCAGGCC CTCCCAGTGG AAATCAACGG TCAGGTTCAC CCGGTGACGG GGCTGGTCGT CGGGGTGACC CTGGCAGACA ACGCGGCGAC GCTGCGCCGG CTGGTCCTGG TCCAGGCGGT CGCGGGACTG CTCATCGTCG TCCTGGGGGT GGCGCTGGCC CAGCTGGTGC TCAACAACGG TCTACGACCA TTGCGTGCCG TCGCGGACAC CGCCCGCGAG ATCGGCCGCG GCAACCTACG CCAACGCGTC CCCGTGGGCG ACCCACGCAC CGAGATCGGC ACAGTTGCCA CCGCACTGAA CGAGGCGTTC GACCAGCGTG AACGCAGCGA GGCGCTGACC CGGACGTTCG TCGCCGACGC TTCGCACGAG CTGCGTACCC CGCTCAGCGC GGTGCACGGA TGGGCCGACC TCTATCTCAA TGACGGAATC ACCGACTGGG ACGGGGTGGA CGAGGCGATG CGCCGGATCC GCACCGAGAC CACCCGGATG GGCGCCCTCG TCGAGCAGCT GCTCACCCTG GCCCGGCTGG ACGCGCACCA ACCGCTGGCA CGCGACGAGG TCGACCTGGG CCGGGTCTGC GCGGACGTGC TGGACAGTCT GCGGGTCACC GCTGCCCATC ATCGACTCAC GCTCGCCGTG GACGAACGGG TGACCGTCAC CGGCGACGCG GCCGCGCTCC GCCAGGTGGT GCAGAACCTG GTCGGCAACG CGGTTCGGCA CACCCCGCCT GGCACGCCGG TCGAGGTGCG CGTCCACCGC GACGACGACG AGGATGCCGT TCTCGTCGTT CACGACGAGG GGCCCGGGCT CGACGCCGAG GGGCTCGCGC ACGCCTTCGA CCGGTTCTGG CGCGCCGACC CCGGGCGGGC GGCACCCGGC GGCACCGGGT TGGGCCTGGC CATTGTCCGA GACATCGTCG GTGCGCATGG CGGCACCGTG GCGCTGGACT CGGCACCCGG GCAGGGACTG ACGGTCACCG TACGACTGCC AGTCGTTGCT GCGTAA
|
Protein sequence | MRRPAVRSLR GRLLVGTVAL LVVGLLAADI SAYLALRRFL SERVDNTIEL VLDRGLARAR LAGQVMPGAG VEQLVPANAY VALYDSEGQL VLARLPLQHG DTRPPTVPPI SALPAHPVTI GDDPDTALRV RRELLPPEQA LPVEINGQVH PVTGLVVGVT LADNAATLRR LVLVQAVAGL LIVVLGVALA QLVLNNGLRP LRAVADTARE IGRGNLRQRV PVGDPRTEIG TVATALNEAF DQRERSEALT RTFVADASHE LRTPLSAVHG WADLYLNDGI TDWDGVDEAM RRIRTETTRM GALVEQLLTL ARLDAHQPLA RDEVDLGRVC ADVLDSLRVT AAHHRLTLAV DERVTVTGDA AALRQVVQNL VGNAVRHTPP GTPVEVRVHR DDDEDAVLVV HDEGPGLDAE GLAHAFDRFW RADPGRAAPG GTGLGLAIVR DIVGAHGGTV ALDSAPGQGL TVTVRLPVVA A
|
| |