| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1372 |
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| Symbol | |
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| ID | 5707291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 1587066 |
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| End bp | 1588505 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641270883 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001536264 |
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| Protein GI | 159037011 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0033883 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGCGGT CGAGAGCTCC GACGGGGACG GGGCCAACCC AGCGGTGGCA CATCCTCAAC
GTCGCGCTGG TCGTCTCGTT CATCAGCCTG TTCGATCTGA GTGTCATCAC CGTGATGCTT
CCCTCGATCG ACCGCGCGCT GGGCGTCGGC AACGGCGCCG TCCAATGGGT CGTCTCCGGC
TACTCGCTGA TGTTCGCGCT CGCTCTCGTC CCCGCGGGTC GGCTCGGCGA CGCCAAAGGA
CGACGGTACG TCCTGCTCCT CGGCCTCGCC TTGTTCGTCG GCGCCAGCAC GATGGCCGGA
CTGGCCGACT CCGGCACCAC ACTGGTGGTC GCCCGGCTCT TACACGGTGC CGCCGCCGGT
GTCCTCGTAC CCCAGATCAC CGCCCTGGTG GAGGAGTTGT TCCGCCCCGG AGAACGAGGG
CGCCCATTCG GAGTGCTCGG TGCCACAACC AGCGTGGCCA CCGCGGTCGG GCCGGTGCTC
GGCGGGCTGA TCATCGCCGT GGGCGGGGCG GAGAACGGCT GGCGGCTGGT CTTTCTCATC
AACGTCCCCG TCGGCATGGT CACGGCGGTG CTCATCTGGC GGCTGTTTCC GACGAAACCA
GTGGACAGCC AGGCAGACCA TCGACCCGAC CTGATCGGCA CGCTGCTGCT GGGCGCCGGG
ATCCTGTTGG TGATCCTGCC CGCGCTGCAA CGGGAACGGT GGACGGGGCT GCTGCCGTGG
CTGTTGGTGC CGGTCGGGAT CGGTGTCCTC GTCGCCTTCC GGTCCTGGGA AACCTCCACG
CTGCGACGCC ACCCGCCGGT CTTCGACTTC CGCCTGCTCA CCCACCGGAC GTACCGCCTG
GGGCTGCTAC TCGGGTTCCT CTACTACGCC GGCTTCACCT CACTACCGGT GATCTTCAGC
TTCCACCTGC AGTACGGCCT ACACCGCAGC CCCCTGCACA CCGGCCTCAC CATCGCGCCA
TTCGCGATCG GCTCCGCGAT CGGCGCCCTG CTAGGCGGAC GGAACGTCGA CCGTTACGGC
CGTCCACTGC TGGCCATCGG ACTCGCCATC GTCATGGCCA GCCTCACCAT GATGATGGCC
CTCACCGGCC TGCACGGGAC GACCTTCTCG ATCGCGAACG CGTTCCCGCT ACTGCTGGCC
GGGATCGGCA GCGGCCTCGT GATCACACCG AACAACACCC TGACCCTCCA GCAGGTGCCC
CGGGCTGACG CCGGCAGCGC CGCCGGCATG TACCGCACCA TGCGGCAGGT CGGATCCGCG
ATCGGGTTGG CGATGATCAC CGCGACCCTG CTCGCGGCGG TCGCGGCCAA CGACGGACGC
TGGCCGACCG CACTTCGCTA CGCGCTCGCG GTGGAGGTCG GCATCGTCGC CGCCGCCCTG
CTCACCAGCC TCGTCGACAT CCTCGGCAGC CGCCGCCACG GACGGAAGCG GGCCCCCTGA
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| Protein sequence | MSRSRAPTGT GPTQRWHILN VALVVSFISL FDLSVITVML PSIDRALGVG NGAVQWVVSG
YSLMFALALV PAGRLGDAKG RRYVLLLGLA LFVGASTMAG LADSGTTLVV ARLLHGAAAG
VLVPQITALV EELFRPGERG RPFGVLGATT SVATAVGPVL GGLIIAVGGA ENGWRLVFLI
NVPVGMVTAV LIWRLFPTKP VDSQADHRPD LIGTLLLGAG ILLVILPALQ RERWTGLLPW
LLVPVGIGVL VAFRSWETST LRRHPPVFDF RLLTHRTYRL GLLLGFLYYA GFTSLPVIFS
FHLQYGLHRS PLHTGLTIAP FAIGSAIGAL LGGRNVDRYG RPLLAIGLAI VMASLTMMMA
LTGLHGTTFS IANAFPLLLA GIGSGLVITP NNTLTLQQVP RADAGSAAGM YRTMRQVGSA
IGLAMITATL LAAVAANDGR WPTALRYALA VEVGIVAAAL LTSLVDILGS RRHGRKRAP
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