| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1355 |
|---|
| Symbol | |
|---|
| ID | 5705569 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 1564629 |
|---|
| End bp | 1565216 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641270866 |
|---|
| Product | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
|---|
| Protein accession | YP_001536247 |
|---|
| Protein GI | 159036994 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0558] Phosphatidylglycerophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.671731 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000165031 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACGGGGG CGGCGGAGTC GGTCCCGGTG GCCCCCCAGG TCCCGGTGCT CAATGCGGCC
AACGCACTGA CCCTGCTGCG CCTGGTGCTG GTGCCGGTCT TCGCGGCGTC GGTGGTGACC
TCTGCGATGA CCCACGTCGG CTGGCGGGTC GCGGCCTGCC TGATCTTCGC CCTGGCCTCC
GTCACCGATC TGGTGGACGG GTGGATCGCT CGCCGCTTCG GGCTGGTCAC CTCGGTGGGC
AAGGTGGCCG ACCCGATCGC GGACAAGGCA CTCACCGGGG CCGCGCTGCT GTTGCTCTCC
TTCTACGACC GGCTTCCGTG GTGGGTCACC GTGGTGATCC TCGTCCGGGA GTGGGGCATC
ACCGCGCTGC GGTTCTGGGT GATCCGGCAC GGCGTCTTGG CGGCCAGCCG GGGCGGGAAG
ATCAAAACGG CCCTGCAGAT CCTCGCGATT GTCTGGTACC TCTGGCCCGT GCCCGCGGCT
CTGGTCGCGG TCGGTCCGTG GGTCATGGGT GCCGCCGTGG TGGTTACGGT GGTCACTGGC
TTCGACTACG TGGTGCGGGC GCTGCGCCTG CGGCGGCCCG CACGCTGA
|
|---|
| Protein sequence | MTGAAESVPV APQVPVLNAA NALTLLRLVL VPVFAASVVT SAMTHVGWRV AACLIFALAS
VTDLVDGWIA RRFGLVTSVG KVADPIADKA LTGAALLLLS FYDRLPWWVT VVILVREWGI
TALRFWVIRH GVLAASRGGK IKTALQILAI VWYLWPVPAA LVAVGPWVMG AAVVVTVVTG
FDYVVRALRL RRPAR
|
|---|
| |