Gene Sare_1347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1347 
Symbol 
ID5704274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp1554168 
End bp1555094 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content71% 
IMG OID641270858 
Productdihydrodipicolinate synthase 
Protein accessionYP_001536239 
Protein GI159036986 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR00674] dihydrodipicolinate synthase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0665282 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000471677 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACGCGCG ACCTCCCTGA CCCTTCCACC CGGGCGGCGT CCCGGCCGTT CGGGCGGGTG 
CTCACGGCCA TGGTGACACC CTTCACCGCC GATGGCGTGC TCGACCTCGA CGGGGCGGCA
CGGTTGGCGA ACTACCTGGT TGACGAGCAG GGCAGCGACG CGCTGGTGGT CAACGGCACT
ACCGGTGAGT CGCCGACCAC GACCGACGCG GAGAAGGAAC GTCTGATCCG GACGGTGGTG
GCGGCCGTTG GTGACCGGGC CAAGGTGGTG GCCGGCGTCG GTACCAACGA CACCCGGCAC
ACGATCGAGC TGGCCGGCAG CGCCGAGAAG GCCGGTGCAC ACGGCCTGCT GGTGGTGACT
CCCTACTACA GCAAGCCGCC GCAGGCGGGC CTGGTGCGAC ACTTCACTGC GGTGGCCGAC
GCCAGCGGGC TACCGCTGAT GCTCTACGAC ATTCCACACC GCGCCGGGGT GGCGATCGAG
ACCGAGACGC TCGTCCGACT CGCCGAGCAC GGCCGGATCG TCGCGGTGAA GGACGCCAAG
ACCGACCTGA CTGCGACCAG CTGGGTGACC AGCCGGACCG GCCTGGCTTT CTACTGCGGT
GAGGACCCGC TCATCCTGCC CGCGCTGGCG GTGGGGTCGG TCGGGGTGGT GGGCACGTCG
ACCCACTTCA CCGGGGCGCG GACCCAGGAG ATGATCCGGG CGTTCGAGGC GGGAGACAAC
GCCACGGCGC TCGCCCTGCA CCGGCGGCTG CTGCCGCTGT ACACGGGCAT CTTCCGGACT
CAGGGCGTGA TCCTGGTCAA GGCCGGCCTG ACGGCGAAGG GACTGCCCGC CGGCCCGGTG
CGTGCCCCGC TGGTGGACGC CACCGCCGAC CAGCTTGCCC AGCTCCGCGC CGACTGCGCG
GCGGCGGGCC TGGACCTCCC TGAATGA
 
Protein sequence
MTRDLPDPST RAASRPFGRV LTAMVTPFTA DGVLDLDGAA RLANYLVDEQ GSDALVVNGT 
TGESPTTTDA EKERLIRTVV AAVGDRAKVV AGVGTNDTRH TIELAGSAEK AGAHGLLVVT
PYYSKPPQAG LVRHFTAVAD ASGLPLMLYD IPHRAGVAIE TETLVRLAEH GRIVAVKDAK
TDLTATSWVT SRTGLAFYCG EDPLILPALA VGSVGVVGTS THFTGARTQE MIRAFEAGDN
ATALALHRRL LPLYTGIFRT QGVILVKAGL TAKGLPAGPV RAPLVDATAD QLAQLRADCA
AAGLDLPE