Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1345 |
Symbol | |
ID | 5704272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 1552613 |
End bp | 1553281 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641270856 |
Product | hypothetical protein |
Protein accession | YP_001536237 |
Protein GI | 159036984 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.405691 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000428453 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | GTGATCGACG TGACGAGTGT TGACGGGCCG CAGGGCCGCG CCGCCGCGGC GACCGATGAC CCGGCTGCAC CCGGCAGCGC CGCCTATCCG CCCGGTGGTG CCGCCCATCC GCCCGGTGGT GCCGCCCATC CACCCGGTGG TGCCGCCCAT CCACCCGGCG GCGCTGACCA TTCGGCCGGC GGATGGCCGG CGGGAGCGGG CCCGGTCTAT TCGGCTCCGG AACCCGACCG GCTGACCCGC TTCGTGCTCC GCCTCCAGGA GCGCACGCCT CGTTGGGTGG TGCCGCTGGC CGCCCTGGGC TGCGTCGGCG CCGGCATCGG TTACACCCTG CTGTTCGACC CGACCCGGTC CGCGCCGGAC GCGGCTCCCA CCTGTCTGCT CAAGCTGACG ACCGGGCTGG ACTGCCCGGG CTGCGGCGGC ACCCGTGCCC TCTGGTATGT GCTGCACGCC GACCTCCCGG CCGCCGCCCG GCACCACGTC CTCCTCGTCT TCGCGCTGCC CTTCCTGGCC TACCTGTTCG TGGCGTGGGC GGGCCGGCAG GCCTTCGGCT GGCGGCTGCC CGAGCTGCGG ATCGGCAACA AGCTGATCGG GGCCGTCCTG GCCGTCTGGT TCGCCTTCTC GGTGGTGCGC AATCTGCCCT GGGCGCCGTT CACCGCGTTC TACGTCTGA
|
Protein sequence | MIDVTSVDGP QGRAAAATDD PAAPGSAAYP PGGAAHPPGG AAHPPGGAAH PPGGADHSAG GWPAGAGPVY SAPEPDRLTR FVLRLQERTP RWVVPLAALG CVGAGIGYTL LFDPTRSAPD AAPTCLLKLT TGLDCPGCGG TRALWYVLHA DLPAAARHHV LLVFALPFLA YLFVAWAGRQ AFGWRLPELR IGNKLIGAVL AVWFAFSVVR NLPWAPFTAF YV
|
| |