Gene Sare_1345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1345 
Symbol 
ID5704272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp1552613 
End bp1553281 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content74% 
IMG OID641270856 
Producthypothetical protein 
Protein accessionYP_001536237 
Protein GI159036984 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.405691 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000428453 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGATCGACG TGACGAGTGT TGACGGGCCG CAGGGCCGCG CCGCCGCGGC GACCGATGAC 
CCGGCTGCAC CCGGCAGCGC CGCCTATCCG CCCGGTGGTG CCGCCCATCC GCCCGGTGGT
GCCGCCCATC CACCCGGTGG TGCCGCCCAT CCACCCGGCG GCGCTGACCA TTCGGCCGGC
GGATGGCCGG CGGGAGCGGG CCCGGTCTAT TCGGCTCCGG AACCCGACCG GCTGACCCGC
TTCGTGCTCC GCCTCCAGGA GCGCACGCCT CGTTGGGTGG TGCCGCTGGC CGCCCTGGGC
TGCGTCGGCG CCGGCATCGG TTACACCCTG CTGTTCGACC CGACCCGGTC CGCGCCGGAC
GCGGCTCCCA CCTGTCTGCT CAAGCTGACG ACCGGGCTGG ACTGCCCGGG CTGCGGCGGC
ACCCGTGCCC TCTGGTATGT GCTGCACGCC GACCTCCCGG CCGCCGCCCG GCACCACGTC
CTCCTCGTCT TCGCGCTGCC CTTCCTGGCC TACCTGTTCG TGGCGTGGGC GGGCCGGCAG
GCCTTCGGCT GGCGGCTGCC CGAGCTGCGG ATCGGCAACA AGCTGATCGG GGCCGTCCTG
GCCGTCTGGT TCGCCTTCTC GGTGGTGCGC AATCTGCCCT GGGCGCCGTT CACCGCGTTC
TACGTCTGA
 
Protein sequence
MIDVTSVDGP QGRAAAATDD PAAPGSAAYP PGGAAHPPGG AAHPPGGAAH PPGGADHSAG 
GWPAGAGPVY SAPEPDRLTR FVLRLQERTP RWVVPLAALG CVGAGIGYTL LFDPTRSAPD
AAPTCLLKLT TGLDCPGCGG TRALWYVLHA DLPAAARHHV LLVFALPFLA YLFVAWAGRQ
AFGWRLPELR IGNKLIGAVL AVWFAFSVVR NLPWAPFTAF YV