Gene Sare_1329 details

Gene Information

• Locus tag: Sare_1329
• Symbol: rbfA
• ID: 5708134
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salinispora arenicola CNS-205
• Kingdom: Bacteria
• Replicon accession: NC_009953
• Strand: +
• Start bp: 1537605
• End bp: 1538075
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 641270840
• Product: ribosome-binding factor A
• Protein accession: YP_001536221
• Protein GI: 159036968
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0858] Ribosome-binding factor A
• TIGRFAM ID: [TIGR00082] ribosome-binding factor A

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 6
• Fosmid unclonability p-value: 0.00402989
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGTCGGATC CGGCCAAGGT GCGCCGGCAC GCGGAGCGGG TGCGTGAACT GGTGGCATCA 
GTGGTACGCA GCCAGATCAA GGATCCTCGG CTCGGCATGA TCACCATCAC GGACGCCCGG 
ATCACCGCTG ACCTACGCGA CGCCACGGTC TTCTACACGG TGCTCGGCGA CACGGCCGCC 
CAGTCGGGCA CCGCCGCGGC GTTGGAGAGC GCCAAGGGAA TGCTGCGCAG CACCGTCGGC 
AAGGCGCTGG GGCTGCGCCA CTCGCCGACG TTGACCTTCG TCCTGGACGA CGTCCAGGAC 
CAGGTCAAGC ACATCGACGA CCTCCTCGCC CAGGCCCGGC ACGCGGACGC TGAGGTGCAG 
CGCCTCGCGG CTCGTGCCGA GTACGCGGGT GAGGCCCAGC CGTACCGGGT GGAGGAGGAG 
CCTGGAGACT CCGAGGACGA GACGCCGCCG TCGAGCCAGG ACCAACGGTG A 

 

Protein sequence

MSDPAKVRRH AERVRELVAS VVRSQIKDPR LGMITITDAR ITADLRDATV FYTVLGDTAA 
QSGTAAALES AKGMLRSTVG KALGLRHSPT LTFVLDDVQD QVKHIDDLLA QARHADAEVQ 
RLAARAEYAG EAQPYRVEEE PGDSEDETPP SSQDQR