Gene Sare_1320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1320 
Symbol 
ID5708125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand+ 
Start bp1529330 
End bp1530043 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content73% 
IMG OID641270831 
Producthypothetical protein 
Protein accessionYP_001536212 
Protein GI159036959 
COG category[S] Function unknown 
COG ID[COG1814] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.230604 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones9 
Fosmid unclonability p-value0.0897781 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAGG CCCCGGCGGC GCTACGGGAG GCGCACCACG CGGACGTCTC CGGAGGCTGG 
TTGCGGCCGG CCGTGTTCGG CGCGATGGAC GGACTGGTCA CCAACATCGC CCTGATCGCG 
GGCGTCGGCG GTGGTGGGGT GTCGCCCCGC GCAGTGGTCC TCACCGGCAC TGCCGGCCTG 
GTCGCCGGTG CGATCTCCAT GGGGCTGGGG GAGTACACCA GCGTCCGGTC GGCCAACGAA 
CAGGTCGCCG CGGAGGTGGC CAAGGAACGG CGCGAGTTGG AGCGGCACCC CGAGGCTGAG 
GCGCGTGAAC TGGCCGACGC CTGGGTGGCC CGTGGTCTGC CCCGGGAACT CGCGACGCAG 
GTCGCCGACG CGGTTCGCCG TAACCCCGAG GAGGCCCTGC GGGTGCACGT CCAGGAGGAA 
CTGGGCGTCG ACCCGGACGA TCAGCCGAGC CCGTGGGCGG CGGCGGTCTC GTCGTTCGTC 
TGCTTCTCCG TCGGCGCCCT GGTGCCCCTG CTGCCCTACC TGATCGGCAG CACCAGCCTC 
TGGCTGGCGC TCGGCACCGG TGGCCTGGGT CTCTTCCTGG CCGGCGCGAT CGTCGCCCGG 
TTCACCAGCC GGCGCTGGTG GTCGTCGGGC CTGCGTCAGC TTCTGTTGGG GGGCCTGGCC 
GCCGTCGCGA CCTATGCCAT CGGCACGCTG ATCGGCCTTC AGGGCGGGCT GTAG
 
Protein sequence
MTEAPAALRE AHHADVSGGW LRPAVFGAMD GLVTNIALIA GVGGGGVSPR AVVLTGTAGL 
VAGAISMGLG EYTSVRSANE QVAAEVAKER RELERHPEAE ARELADAWVA RGLPRELATQ 
VADAVRRNPE EALRVHVQEE LGVDPDDQPS PWAAAVSSFV CFSVGALVPL LPYLIGSTSL 
WLALGTGGLG LFLAGAIVAR FTSRRWWSSG LRQLLLGGLA AVATYAIGTL IGLQGGL