Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1307 |
Symbol | |
ID | 5703687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 1515857 |
End bp | 1516756 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641270818 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001536199 |
Protein GI | 159036946 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.151615 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAACA GGATCATTCT GGTCACCGGA GCTTCCAGCG GCATCGGTGC ACTGACCGTG CGTGCCCTCG CCGAAGCCGG GCACACCGTC TATGCGGGAA TCCGTGCGAC GGCCAGCCGC AACGCCGCGG CCGTGGCGCA ACTCCACCGG TACGCCGCCG ACCGCGGTGT GCGGCTACGG GCGGTGGAAC TCGACGTGAC CTCGCAGGAG TCGGTCGACA CCGCGGTCGG CCATGTTGTC ACCGCCGCGG GCGGGCTCGA TGTGGTGGTG CACAACGCCG GGCACATGGT CGTCGGTCCG GCCGAGGCAT TCACACCGGA GCAACTGGCC GACCTGTACG ACGTGAATGT ACTGGGCACC CAGCGGGTGA ATCGGGCGGC CCTTCCGCAC CTCCGCGAGC AGGGCTCGGG CCTGCTGGTG TGGGTCGGCT CGTCGAGTAC CCGCGGTGGG ACGCCGCCGT TCGTCGGCCC CTACTTCGCC GCGAAGGCGG CGATGGACGC CTTGGCGGTC AGCTACGCGG CCGAGATCAT CCGGTTCGGC GTCGAGACGG CGATCGTCGT CCCCGGCGCG TTTCCCGGCG GCACCAACCA CTTCGCTCAT GCCGGCGGTC CGGCCGACAC CGCCCGTAGC GCCGCCTACG ACCAGAGGTA CGGCAACGAC ATCGCCGATC TCGCTCCCAG GCTCAGCGCG CTGATGCCGC CGGACGCCGA TGTCGCCGAG GTGGCTCGGG CTGTCACCGG CATCGTCGAC CAGCCCGCCG GCACCCGGCC CTTCCGCACC CACATCGATC CGAGCCGCGA CGGCAGCGAT GTCGTTTCGA CGGTGGCCGA CCGGATTCGG GCCGAGTTCC TTGGCCGCGT CGGCCTGGCT GACCTGTTGA CCCCCGGAAG CAGCCGCTGA
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Protein sequence | MANRIILVTG ASSGIGALTV RALAEAGHTV YAGIRATASR NAAAVAQLHR YAADRGVRLR AVELDVTSQE SVDTAVGHVV TAAGGLDVVV HNAGHMVVGP AEAFTPEQLA DLYDVNVLGT QRVNRAALPH LREQGSGLLV WVGSSSTRGG TPPFVGPYFA AKAAMDALAV SYAAEIIRFG VETAIVVPGA FPGGTNHFAH AGGPADTARS AAYDQRYGND IADLAPRLSA LMPPDADVAE VARAVTGIVD QPAGTRPFRT HIDPSRDGSD VVSTVADRIR AEFLGRVGLA DLLTPGSSR
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