Gene Sare_1307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1307 
Symbol 
ID5703687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp1515857 
End bp1516756 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content70% 
IMG OID641270818 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001536199 
Protein GI159036946 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.151615 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAACA GGATCATTCT GGTCACCGGA GCTTCCAGCG GCATCGGTGC ACTGACCGTG 
CGTGCCCTCG CCGAAGCCGG GCACACCGTC TATGCGGGAA TCCGTGCGAC GGCCAGCCGC
AACGCCGCGG CCGTGGCGCA ACTCCACCGG TACGCCGCCG ACCGCGGTGT GCGGCTACGG
GCGGTGGAAC TCGACGTGAC CTCGCAGGAG TCGGTCGACA CCGCGGTCGG CCATGTTGTC
ACCGCCGCGG GCGGGCTCGA TGTGGTGGTG CACAACGCCG GGCACATGGT CGTCGGTCCG
GCCGAGGCAT TCACACCGGA GCAACTGGCC GACCTGTACG ACGTGAATGT ACTGGGCACC
CAGCGGGTGA ATCGGGCGGC CCTTCCGCAC CTCCGCGAGC AGGGCTCGGG CCTGCTGGTG
TGGGTCGGCT CGTCGAGTAC CCGCGGTGGG ACGCCGCCGT TCGTCGGCCC CTACTTCGCC
GCGAAGGCGG CGATGGACGC CTTGGCGGTC AGCTACGCGG CCGAGATCAT CCGGTTCGGC
GTCGAGACGG CGATCGTCGT CCCCGGCGCG TTTCCCGGCG GCACCAACCA CTTCGCTCAT
GCCGGCGGTC CGGCCGACAC CGCCCGTAGC GCCGCCTACG ACCAGAGGTA CGGCAACGAC
ATCGCCGATC TCGCTCCCAG GCTCAGCGCG CTGATGCCGC CGGACGCCGA TGTCGCCGAG
GTGGCTCGGG CTGTCACCGG CATCGTCGAC CAGCCCGCCG GCACCCGGCC CTTCCGCACC
CACATCGATC CGAGCCGCGA CGGCAGCGAT GTCGTTTCGA CGGTGGCCGA CCGGATTCGG
GCCGAGTTCC TTGGCCGCGT CGGCCTGGCT GACCTGTTGA CCCCCGGAAG CAGCCGCTGA
 
Protein sequence
MANRIILVTG ASSGIGALTV RALAEAGHTV YAGIRATASR NAAAVAQLHR YAADRGVRLR 
AVELDVTSQE SVDTAVGHVV TAAGGLDVVV HNAGHMVVGP AEAFTPEQLA DLYDVNVLGT
QRVNRAALPH LREQGSGLLV WVGSSSTRGG TPPFVGPYFA AKAAMDALAV SYAAEIIRFG
VETAIVVPGA FPGGTNHFAH AGGPADTARS AAYDQRYGND IADLAPRLSA LMPPDADVAE
VARAVTGIVD QPAGTRPFRT HIDPSRDGSD VVSTVADRIR AEFLGRVGLA DLLTPGSSR