Gene Sare_1292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1292 
Symbol 
ID5706254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand+ 
Start bp1503257 
End bp1503868 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content64% 
IMG OID641270805 
Productprotein of unknown function ATP binding 
Protein accessionYP_001536186 
Protein GI159036933 
COG category[R] General function prediction only 
COG ID[COG2229] Predicted GTPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.980215 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones7 
Fosmid unclonability p-value0.00348486 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACTACG AGCACTCTGA GGGCGACGCT GAGACCGTCC TTCCCACCGT TGTCAAGATC 
CTTATTGCGG GTGGCTTCGG CGTCGGCAAG ACCACCCTCG TCGGCGCCGT GAGCGAAACG 
AAACCGTTGC GCACCGAGGA GGTGCTCTCC GAACAGGGCG TGGGAGTCGA CGATCTATCC 
GGTGTCGAGA TGAAGTCGAC CACGACGGTG GCCATGGACT TCGGCCGTAT CAGCTTCGGC 
GACGACCTTG TGCTGTATCT CTTCGGTACC CCTGGACAGG ACCGATTCTG GTTCGTCTGG 
GACGAATTGG CGTTGGGGGC TCTGGGAGCG GTCGTGCTGG CCGACACCCG TCGTATCGCG 
GACTGCTTTC CCTCGGTCGA CTACTTCGAG CGCCACCGGC TGCCGTTCAT CGTGGCGGTG 
AACTGCTTCG ACGGGGCACA CTCCTACAAC CTGGACGAGG TGCAGACGGC CCTCAACCTT 
GACCCGGACG TGCCGGTGAT GCTGTGTGAC GCCAGGAAGC GGGAGTCGAG CAAGGAAGTC 
CTCATCACCC TGCTTCAGCA CGTCATGAAG GGCCGGGGCG CGGGCCGCGC TGCCCAACCG 
GTCGGCTCCT GA
 
Protein sequence
MDYEHSEGDA ETVLPTVVKI LIAGGFGVGK TTLVGAVSET KPLRTEEVLS EQGVGVDDLS 
GVEMKSTTTV AMDFGRISFG DDLVLYLFGT PGQDRFWFVW DELALGALGA VVLADTRRIA 
DCFPSVDYFE RHRLPFIVAV NCFDGAHSYN LDEVQTALNL DPDVPVMLCD ARKRESSKEV 
LITLLQHVMK GRGAGRAAQP VGS