Gene Sare_1290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1290 
Symbol 
ID5706252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp1502471 
End bp1502890 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content62% 
IMG OID641270803 
Productroadblock/LC7 family protein 
Protein accessionYP_001536184 
Protein GI159036931 
COG category[R] General function prediction only 
COG ID[COG2018] Uncharacterized distant relative of homeotic protein bithoraxoid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.384978 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00358681 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGTACAGT ACAGATCGAA TGCCGATCTG GCCTTTTTGC TCAACGACCT GGTGAGCCAG 
GTCACGCAGG TCGAGAGCGC CATCGTCCTC TCCGTCGACG GACTGCTCAT CACCACATCG
GCGGAAATCA GCCGCGATGA CGGCGAGCAC CTGGCGGCGA TCGCCTCCGG GATCCAGAGC
CTCGCCAAGG GTGCGGGTCA ACGCTTTGGC AGTGGCGGCA ACGTGCGGCA GACGATTATC
GAGTTGGACT CGTCGTTCTT GTTCGTCATG GCTGCCGGCA ACGGTGCATG CCTGGCTGTC
CTTGCGGCAG AGGGCGCCGA CGTCGGACTC ATCGCCTACG AGATGGCCGT GCTCGTTGGT
CGAGCCGGCA AGTATCTCGC CGCCGCGACT CGGACGCCCG AATCGTCAAT TAGTAACTAG
 
Protein sequence
MVQYRSNADL AFLLNDLVSQ VTQVESAIVL SVDGLLITTS AEISRDDGEH LAAIASGIQS 
LAKGAGQRFG SGGNVRQTII ELDSSFLFVM AAGNGACLAV LAAEGADVGL IAYEMAVLVG
RAGKYLAAAT RTPESSISN