Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1290 |
Symbol | |
ID | 5706252 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 1502471 |
End bp | 1502890 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641270803 |
Product | roadblock/LC7 family protein |
Protein accession | YP_001536184 |
Protein GI | 159036931 |
COG category | [R] General function prediction only |
COG ID | [COG2018] Uncharacterized distant relative of homeotic protein bithoraxoid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.384978 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00358681 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGTACAGT ACAGATCGAA TGCCGATCTG GCCTTTTTGC TCAACGACCT GGTGAGCCAG GTCACGCAGG TCGAGAGCGC CATCGTCCTC TCCGTCGACG GACTGCTCAT CACCACATCG GCGGAAATCA GCCGCGATGA CGGCGAGCAC CTGGCGGCGA TCGCCTCCGG GATCCAGAGC CTCGCCAAGG GTGCGGGTCA ACGCTTTGGC AGTGGCGGCA ACGTGCGGCA GACGATTATC GAGTTGGACT CGTCGTTCTT GTTCGTCATG GCTGCCGGCA ACGGTGCATG CCTGGCTGTC CTTGCGGCAG AGGGCGCCGA CGTCGGACTC ATCGCCTACG AGATGGCCGT GCTCGTTGGT CGAGCCGGCA AGTATCTCGC CGCCGCGACT CGGACGCCCG AATCGTCAAT TAGTAACTAG
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Protein sequence | MVQYRSNADL AFLLNDLVSQ VTQVESAIVL SVDGLLITTS AEISRDDGEH LAAIASGIQS LAKGAGQRFG SGGNVRQTII ELDSSFLFVM AAGNGACLAV LAAEGADVGL IAYEMAVLVG RAGKYLAAAT RTPESSISN
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