Gene Sare_1278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1278 
Symbol 
ID5706503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp1478771 
End bp1480342 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content72% 
IMG OID641270793 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001536174 
Protein GI159036921 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1233] Phytoene dehydrogenase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00650672 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGACGTCG TCATCGTCGG TGCCGGGCAC AACGGACTGG TGTCGGCGAT CCTGCTGGCA 
CGGGCCGGGC TGGACGTGCT GGTGTTGGAG GCCGCCGACA TGCTCGGCGG TGCGGCCCGC
ACCGAAACGC CCTTTCCCAA GGTGCCGGGG CTGCGCCACT CCACCGGGTC GTACCTGCTC
GGATTGATGC CGCCGGAACT GCTCGCCACG CTCGACGTCA GCATCCCCGT GCTGCGGCGC
GATCCGCACT ACTTCCTGCC CACGCCGGGT GGGCCCGGAT CGCCGTACCT GCTCTTCGGC
AGCGACCCGA CCGCGACCCG TCGGCAGTTC GCCGAGTTCT TCTCCCCCGC CGACGTCGCC
GCCGACGCCG CGCTCCAGGC CGAACTGACC GCGCTGCGCT CGGACCTGGC GCCGGCCTGG
CTGGCCGAGC CGCTACCGGT CGAGGAGACC GCCGAGCGGT ACGTCCGGCC GGCGCTGCGC
CAGGTCTTCG TCGACCTGGT CCGCGGCTCG GTCGTCGATC ACCTGGCCCG CTTCGACTTC
CGCTCCGAAC TGTTGGTCAG CATGTACGCG GTGACCGACG GGCTGTCCGG GGTCAACGCC
GGCCCGGACG ATCCCGGCAC CGGCAACAAC TTCCTGGTCC ACAACATGTG TCGGCTACCC
GGCTCCGACG GCACATGGAT GATCGCCAAG GGGGGCATGG GCACCGTCTC CCGGACCTTC
GCCGATGCCG CGCGCGCCGC CGGCGCGACC ATCCGCACCG GTACACGGGT CAGCGCGATC
ACCCTCGACG GGGGTGCCGC GTCCGGTGTC GTGCTCGCCA CCGGGCAGGC CGTCGGCGCG
TCCGTGGTGC TGGGGGCCTG CGACCCGTAC CGGCTGATGG AGTTGCTCCC CGACGATGCG
CTCCCGGCAC CGCTGACCGA CCGGATGACC GCGGTCCGCC GCCCCGGCAC CACGTTGAAG
CTCAACCTGG CGCTGACCGG GCTGCCCCAC TTCTCCTGCC TGCCCGTGGA CGCCCCCAGT
CCGTTCGGGT CCACCATCCA CCTGCTGCCC GGCTCCGCCC CCGGCACCAG CCGCGACGGC
GACACACCGT TGGCGGCGCT GCGCGCGATG TGGGCCGACG TGCGGGCCGG GCGGCTGCCA
CCGGAGCCGA CCATCGAGTG GTACCTGCAC ACCACCGTCG ACCCGACACT CTCCGACGAT
GCCGGGCACC ACTCGTCAGC GTTGTTCGTG CAGTCGGTGC CCTACGAGTT GGCGGGCACG
ACCTGGGACG AGGCGATGCC CGGGTACGTG GCGCGGTTGG TGGCGATCTG CGAGCGGTAC
GCTCCGGGCA CCGAGGCCCT GATCGCCGAC GCCGTACCGC TGGCCCCGCC CGGCATCGAG
GCGCACTTCG GCATCACCGG CGGGCACATC CACCACGTGG ACAACACCGT GTCGTTCACC
GACCGGATGC CGTACGCGAC CGGGGTCGAC GGCGTCTACG CGGGCAGCGC CGGCTGCCAC
CCGGCGGGCA GTGTCATCGG CGCGTCCGGC CACAACGCCG CCCAGCGCAT CCTCACCGAC
CTCGGACGGT GA
 
Protein sequence
MDVVIVGAGH NGLVSAILLA RAGLDVLVLE AADMLGGAAR TETPFPKVPG LRHSTGSYLL 
GLMPPELLAT LDVSIPVLRR DPHYFLPTPG GPGSPYLLFG SDPTATRRQF AEFFSPADVA
ADAALQAELT ALRSDLAPAW LAEPLPVEET AERYVRPALR QVFVDLVRGS VVDHLARFDF
RSELLVSMYA VTDGLSGVNA GPDDPGTGNN FLVHNMCRLP GSDGTWMIAK GGMGTVSRTF
ADAARAAGAT IRTGTRVSAI TLDGGAASGV VLATGQAVGA SVVLGACDPY RLMELLPDDA
LPAPLTDRMT AVRRPGTTLK LNLALTGLPH FSCLPVDAPS PFGSTIHLLP GSAPGTSRDG
DTPLAALRAM WADVRAGRLP PEPTIEWYLH TTVDPTLSDD AGHHSSALFV QSVPYELAGT
TWDEAMPGYV ARLVAICERY APGTEALIAD AVPLAPPGIE AHFGITGGHI HHVDNTVSFT
DRMPYATGVD GVYAGSAGCH PAGSVIGASG HNAAQRILTD LGR