Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1278 |
Symbol | |
ID | 5706503 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 1478771 |
End bp | 1480342 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641270793 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_001536174 |
Protein GI | 159036921 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00650672 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGACGTCG TCATCGTCGG TGCCGGGCAC AACGGACTGG TGTCGGCGAT CCTGCTGGCA CGGGCCGGGC TGGACGTGCT GGTGTTGGAG GCCGCCGACA TGCTCGGCGG TGCGGCCCGC ACCGAAACGC CCTTTCCCAA GGTGCCGGGG CTGCGCCACT CCACCGGGTC GTACCTGCTC GGATTGATGC CGCCGGAACT GCTCGCCACG CTCGACGTCA GCATCCCCGT GCTGCGGCGC GATCCGCACT ACTTCCTGCC CACGCCGGGT GGGCCCGGAT CGCCGTACCT GCTCTTCGGC AGCGACCCGA CCGCGACCCG TCGGCAGTTC GCCGAGTTCT TCTCCCCCGC CGACGTCGCC GCCGACGCCG CGCTCCAGGC CGAACTGACC GCGCTGCGCT CGGACCTGGC GCCGGCCTGG CTGGCCGAGC CGCTACCGGT CGAGGAGACC GCCGAGCGGT ACGTCCGGCC GGCGCTGCGC CAGGTCTTCG TCGACCTGGT CCGCGGCTCG GTCGTCGATC ACCTGGCCCG CTTCGACTTC CGCTCCGAAC TGTTGGTCAG CATGTACGCG GTGACCGACG GGCTGTCCGG GGTCAACGCC GGCCCGGACG ATCCCGGCAC CGGCAACAAC TTCCTGGTCC ACAACATGTG TCGGCTACCC GGCTCCGACG GCACATGGAT GATCGCCAAG GGGGGCATGG GCACCGTCTC CCGGACCTTC GCCGATGCCG CGCGCGCCGC CGGCGCGACC ATCCGCACCG GTACACGGGT CAGCGCGATC ACCCTCGACG GGGGTGCCGC GTCCGGTGTC GTGCTCGCCA CCGGGCAGGC CGTCGGCGCG TCCGTGGTGC TGGGGGCCTG CGACCCGTAC CGGCTGATGG AGTTGCTCCC CGACGATGCG CTCCCGGCAC CGCTGACCGA CCGGATGACC GCGGTCCGCC GCCCCGGCAC CACGTTGAAG CTCAACCTGG CGCTGACCGG GCTGCCCCAC TTCTCCTGCC TGCCCGTGGA CGCCCCCAGT CCGTTCGGGT CCACCATCCA CCTGCTGCCC GGCTCCGCCC CCGGCACCAG CCGCGACGGC GACACACCGT TGGCGGCGCT GCGCGCGATG TGGGCCGACG TGCGGGCCGG GCGGCTGCCA CCGGAGCCGA CCATCGAGTG GTACCTGCAC ACCACCGTCG ACCCGACACT CTCCGACGAT GCCGGGCACC ACTCGTCAGC GTTGTTCGTG CAGTCGGTGC CCTACGAGTT GGCGGGCACG ACCTGGGACG AGGCGATGCC CGGGTACGTG GCGCGGTTGG TGGCGATCTG CGAGCGGTAC GCTCCGGGCA CCGAGGCCCT GATCGCCGAC GCCGTACCGC TGGCCCCGCC CGGCATCGAG GCGCACTTCG GCATCACCGG CGGGCACATC CACCACGTGG ACAACACCGT GTCGTTCACC GACCGGATGC CGTACGCGAC CGGGGTCGAC GGCGTCTACG CGGGCAGCGC CGGCTGCCAC CCGGCGGGCA GTGTCATCGG CGCGTCCGGC CACAACGCCG CCCAGCGCAT CCTCACCGAC CTCGGACGGT GA
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Protein sequence | MDVVIVGAGH NGLVSAILLA RAGLDVLVLE AADMLGGAAR TETPFPKVPG LRHSTGSYLL GLMPPELLAT LDVSIPVLRR DPHYFLPTPG GPGSPYLLFG SDPTATRRQF AEFFSPADVA ADAALQAELT ALRSDLAPAW LAEPLPVEET AERYVRPALR QVFVDLVRGS VVDHLARFDF RSELLVSMYA VTDGLSGVNA GPDDPGTGNN FLVHNMCRLP GSDGTWMIAK GGMGTVSRTF ADAARAAGAT IRTGTRVSAI TLDGGAASGV VLATGQAVGA SVVLGACDPY RLMELLPDDA LPAPLTDRMT AVRRPGTTLK LNLALTGLPH FSCLPVDAPS PFGSTIHLLP GSAPGTSRDG DTPLAALRAM WADVRAGRLP PEPTIEWYLH TTVDPTLSDD AGHHSSALFV QSVPYELAGT TWDEAMPGYV ARLVAICERY APGTEALIAD AVPLAPPGIE AHFGITGGHI HHVDNTVSFT DRMPYATGVD GVYAGSAGCH PAGSVIGASG HNAAQRILTD LGR
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