Gene Sare_1270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1270 
Symbol 
ID5704483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp1471788 
End bp1473053 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content66% 
IMG OID641270785 
ProductLuxR family transcriptional regulator 
Protein accessionYP_001536166 
Protein GI159036913 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000582862 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGTCAGATT CATGTGAGAC CGCCGGTCTT TTTCGGCATT CCGCACTGTC GTGGTACAAC 
GGGCGGCTCG ACGAGGGGTT GCAGTACGCC GCGGCGGCGG TCGACACGAG GTGCGAGGAG
CGCCACGAGT TCTGTACGCT GGCTCCCTTC TGGCGGGTCG CGTTGCTGAC CAAGGCCAGG
GAGCTCACGG CCGGCTGGCG GGCGATCAAC GCCCCCGAGC TGCACAGGGG TGGGTCGGAG
TCGCTGCTCA TGACCGCGAC GTCGCAGATC ATTCGGGGTG AGTTGCTGTT CGCCAGGGGG
TTCGTCGACG ACGGCCTGGC CGACGTGCAG GCGGGGCTGC GCGCCGCGGA GCGTTGCGAA
GCCCGACTGT TGCTGCCCAT CGGCTACGTG GTGCTGGCGC TCGCCGCGTT CCGCCGGGCG
GACATGAGAA CCTGCCTGCA CTTCGTGGAC AAGTTGACCG GTGAAGCCTT GCTGGGCTAC
TTCGGGCAGG CCGCGGGAGC GTGGGTGACC GCGCAGGTGG CAGAGGCGCG CGGCGAGACG
GACAGGGCGG CCGGTCTCAT CGCCGGAATC GTCAACGACC GTCTCATTCT TCGCCAACTC
CTGGTGTCCG AGCCGGCGGC GGCGTCGTGG CTGGTTCGCG CCTCCTGCAA GCTGGGTGCC
CGTGAGCTTG CGGAAGCAAC GGTGACGGCG GCCGCGGTCG CGGCCACGGA ACATTTGGGA
TTCCGCGTCA TCCGCGGTGC GGCGTTACAC GCCGCCGGAC TGCTGGAGGA GAATCCCGGC
AAGTTGCGGG AGGCGGCGAA CATCTACCCT GACCAGTGGT GCGGGGCGTC CGCGAGGGAG
GACCTGGCCG GCTTGCTGGC CGGGCGGCGG TCCGATCGGA GCAATACTGT TCGGACCTTC
GAATTGGCGC TGGGCGCCTA CACCGCGGTC GGTGCCGCAC GCGACGCTTC CCGGGTCGCA
AACAAGCTTC GCGACTTTGG TGTCCGACGT GGCGTTACCC GGCCCGTACA ACGTTCGGGT
AATGAGCCGC ACGGACTCAC CAACATGGAG TTCGCGGTCG CGGAGCTCGT GAGTCAGGGG
CACACCAACA ATGAAGTCGG CAGGCAATTA TTCATCTCCC GGCACACTGT GGCATTCCAC
CTCAAGAAGG TGTACCAGAA GATGAGCATC ACATCGCGTG TGGAGTTGGC GGCCAGCTGG
AAACAACCCC ATGGTGGCGC GAGTCCTAAT ATCCGAGAAT ATGATGATGG TGGAGGGCGC
TGGTGA
 
Protein sequence
MSDSCETAGL FRHSALSWYN GRLDEGLQYA AAAVDTRCEE RHEFCTLAPF WRVALLTKAR 
ELTAGWRAIN APELHRGGSE SLLMTATSQI IRGELLFARG FVDDGLADVQ AGLRAAERCE
ARLLLPIGYV VLALAAFRRA DMRTCLHFVD KLTGEALLGY FGQAAGAWVT AQVAEARGET
DRAAGLIAGI VNDRLILRQL LVSEPAAASW LVRASCKLGA RELAEATVTA AAVAATEHLG
FRVIRGAALH AAGLLEENPG KLREAANIYP DQWCGASARE DLAGLLAGRR SDRSNTVRTF
ELALGAYTAV GAARDASRVA NKLRDFGVRR GVTRPVQRSG NEPHGLTNME FAVAELVSQG
HTNNEVGRQL FISRHTVAFH LKKVYQKMSI TSRVELAASW KQPHGGASPN IREYDDGGGR
W