Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1270 |
Symbol | |
ID | 5704483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 1471788 |
End bp | 1473053 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641270785 |
Product | LuxR family transcriptional regulator |
Protein accession | YP_001536166 |
Protein GI | 159036913 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000582862 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGTCAGATT CATGTGAGAC CGCCGGTCTT TTTCGGCATT CCGCACTGTC GTGGTACAAC GGGCGGCTCG ACGAGGGGTT GCAGTACGCC GCGGCGGCGG TCGACACGAG GTGCGAGGAG CGCCACGAGT TCTGTACGCT GGCTCCCTTC TGGCGGGTCG CGTTGCTGAC CAAGGCCAGG GAGCTCACGG CCGGCTGGCG GGCGATCAAC GCCCCCGAGC TGCACAGGGG TGGGTCGGAG TCGCTGCTCA TGACCGCGAC GTCGCAGATC ATTCGGGGTG AGTTGCTGTT CGCCAGGGGG TTCGTCGACG ACGGCCTGGC CGACGTGCAG GCGGGGCTGC GCGCCGCGGA GCGTTGCGAA GCCCGACTGT TGCTGCCCAT CGGCTACGTG GTGCTGGCGC TCGCCGCGTT CCGCCGGGCG GACATGAGAA CCTGCCTGCA CTTCGTGGAC AAGTTGACCG GTGAAGCCTT GCTGGGCTAC TTCGGGCAGG CCGCGGGAGC GTGGGTGACC GCGCAGGTGG CAGAGGCGCG CGGCGAGACG GACAGGGCGG CCGGTCTCAT CGCCGGAATC GTCAACGACC GTCTCATTCT TCGCCAACTC CTGGTGTCCG AGCCGGCGGC GGCGTCGTGG CTGGTTCGCG CCTCCTGCAA GCTGGGTGCC CGTGAGCTTG CGGAAGCAAC GGTGACGGCG GCCGCGGTCG CGGCCACGGA ACATTTGGGA TTCCGCGTCA TCCGCGGTGC GGCGTTACAC GCCGCCGGAC TGCTGGAGGA GAATCCCGGC AAGTTGCGGG AGGCGGCGAA CATCTACCCT GACCAGTGGT GCGGGGCGTC CGCGAGGGAG GACCTGGCCG GCTTGCTGGC CGGGCGGCGG TCCGATCGGA GCAATACTGT TCGGACCTTC GAATTGGCGC TGGGCGCCTA CACCGCGGTC GGTGCCGCAC GCGACGCTTC CCGGGTCGCA AACAAGCTTC GCGACTTTGG TGTCCGACGT GGCGTTACCC GGCCCGTACA ACGTTCGGGT AATGAGCCGC ACGGACTCAC CAACATGGAG TTCGCGGTCG CGGAGCTCGT GAGTCAGGGG CACACCAACA ATGAAGTCGG CAGGCAATTA TTCATCTCCC GGCACACTGT GGCATTCCAC CTCAAGAAGG TGTACCAGAA GATGAGCATC ACATCGCGTG TGGAGTTGGC GGCCAGCTGG AAACAACCCC ATGGTGGCGC GAGTCCTAAT ATCCGAGAAT ATGATGATGG TGGAGGGCGC TGGTGA
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Protein sequence | MSDSCETAGL FRHSALSWYN GRLDEGLQYA AAAVDTRCEE RHEFCTLAPF WRVALLTKAR ELTAGWRAIN APELHRGGSE SLLMTATSQI IRGELLFARG FVDDGLADVQ AGLRAAERCE ARLLLPIGYV VLALAAFRRA DMRTCLHFVD KLTGEALLGY FGQAAGAWVT AQVAEARGET DRAAGLIAGI VNDRLILRQL LVSEPAAASW LVRASCKLGA RELAEATVTA AAVAATEHLG FRVIRGAALH AAGLLEENPG KLREAANIYP DQWCGASARE DLAGLLAGRR SDRSNTVRTF ELALGAYTAV GAARDASRVA NKLRDFGVRR GVTRPVQRSG NEPHGLTNME FAVAELVSQG HTNNEVGRQL FISRHTVAFH LKKVYQKMSI TSRVELAASW KQPHGGASPN IREYDDGGGR W
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