| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1232 |
|---|
| Symbol | |
|---|
| ID | 5705927 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 1381051 |
|---|
| End bp | 1381806 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641270748 |
|---|
| Product | uridylate kinase |
|---|
| Protein accession | YP_001536129 |
|---|
| Protein GI | 159036876 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0528] Uridylate kinase |
|---|
| TIGRFAM ID | [TIGR02075] uridylate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0721616 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0052934 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAGTGACC GGAGTCTGAT GGCGGAGGAT CCGACGGCGC CGCCTCCCGG CCGAGCCCGT
CGGGTGGTTC TGAAGCTCTC CGGCGAGGTG TTCGGCGGGG GCGCGATCGG TGTCGACCCT
GATGTTGTCC AGGCCATCGC CCGGCAGATC GCGGCGGTGG TCCGGCGTGG CGTGCAGGTC
TCGGTGGTGG TGGGGGGAGG CAACTTCTTC CGGGGCGCCG AGTTGCAGAA GCGGGGCATG
GACCGGGCCC GAGCCGACTA CATGGGCATG CTCGGCACAG TGATGAACTG CCTCGCGCTT
CAGGACTTCC TGGAAAAGGA GGGCATCGAG ACCCGGGTGC AGAGCGCCAT CACCATGGCT
CAGGTCGCTG AGCCGTACAT TCCGCTGCGT GCCATCCGGC ACCTCGAGAA GGGGCGGGTG
GTGATCTTCG GTGCCGGTGC GGGCATGCCG TACTTCTCCA CCGACACCGT CGCCGCCCAG
CGTGCTCTGG AGATCCGGGC CGATGTGGTG CTGATGAGTA AGAACGGGGT GGACGGGGTT
TACACGGCGG ATCCGCGTAT CGACCCGACG GCCAGCAAGT TCGACTCGAT CACCTTTTCC
GAGGTGCTCA GTCGTAACCT GCGGGTCGCC GATGCCGCCG CCTTCAGCCT CTGCATGGAA
AACGGCCTGC CGATGTTGGT CTTCGGCGCC CAGGGCGACG ACACCATTAC CCGGGCCGTG
GGTGGCGACA AGATTGGCAC CCTGATCACC ACCTGA
|
|---|
| Protein sequence | MSDRSLMAED PTAPPPGRAR RVVLKLSGEV FGGGAIGVDP DVVQAIARQI AAVVRRGVQV
SVVVGGGNFF RGAELQKRGM DRARADYMGM LGTVMNCLAL QDFLEKEGIE TRVQSAITMA
QVAEPYIPLR AIRHLEKGRV VIFGAGAGMP YFSTDTVAAQ RALEIRADVV LMSKNGVDGV
YTADPRIDPT ASKFDSITFS EVLSRNLRVA DAAAFSLCME NGLPMLVFGA QGDDTITRAV
GGDKIGTLIT T
|
|---|
| |