Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1221 |
Symbol | |
ID | 5706388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 1370079 |
End bp | 1370744 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641270738 |
Product | NUDIX hydrolase |
Protein accession | YP_001536119 |
Protein GI | 159036866 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.365989 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGCA CCTACACCCA TCCCAGTGTC TTGAACGGCA TCGCTGCTGG GGCATCGTGG GCCGATCCGG AGATGGACCC GACCCGTATC GACTGGACTG CCCGCCGGGC TGTCGCCGCG ATTCCGTTTC CGCTGGTCGA CGGGCGGCCG GTCAACCCGG CCGCGCCGAC TGGCATCCGC TACGGCCGCA ACGAGCTCGG TCACTGGGGT GAGGCGCAGG CCGCCGACGC GATCGTCACC GCAACGGATT CTGACGGTGA CCGGTGGTTG CTGCTGATCG AGCGCGACGA CAACCACGGA TGGGCGCTGC CCGGCGGGCA CGTCGACCCC GGCGAGACCC CCACCGCCGC CGCGTTCCGT GAGCTGACCG AGGAAACCGG ACTTGTCGCC AACCCCACCG ACCCGTGGGT TACGACGCTG CCCGCCCGGG TCGTGCCCGA CCCCCGCGCA TCCGACGAGG CATGGATGGT CACCACGCCT GTCCACGTCG ATCTCAGGCG CGGGTTCCGC ATCCTGCCGG ACGTGACCGG CGCCGACGAC GCCCGCCGCG CCGTCTGGCT TCCCGCCGAC GACTACGACT GCCTGCTGAC CCACCTCGAC GTGTTGCACG GCGGCCGGCT GTTCGCAGCC CACCGCGACC TGATCGCGGA CGCCCTCACT CACTGA
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Protein sequence | MNRTYTHPSV LNGIAAGASW ADPEMDPTRI DWTARRAVAA IPFPLVDGRP VNPAAPTGIR YGRNELGHWG EAQAADAIVT ATDSDGDRWL LLIERDDNHG WALPGGHVDP GETPTAAAFR ELTEETGLVA NPTDPWVTTL PARVVPDPRA SDEAWMVTTP VHVDLRRGFR ILPDVTGADD ARRAVWLPAD DYDCLLTHLD VLHGGRLFAA HRDLIADALT H
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