Gene Sare_1221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1221 
Symbol 
ID5706388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp1370079 
End bp1370744 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content71% 
IMG OID641270738 
ProductNUDIX hydrolase 
Protein accessionYP_001536119 
Protein GI159036866 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.365989 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCA CCTACACCCA TCCCAGTGTC TTGAACGGCA TCGCTGCTGG GGCATCGTGG 
GCCGATCCGG AGATGGACCC GACCCGTATC GACTGGACTG CCCGCCGGGC TGTCGCCGCG
ATTCCGTTTC CGCTGGTCGA CGGGCGGCCG GTCAACCCGG CCGCGCCGAC TGGCATCCGC
TACGGCCGCA ACGAGCTCGG TCACTGGGGT GAGGCGCAGG CCGCCGACGC GATCGTCACC
GCAACGGATT CTGACGGTGA CCGGTGGTTG CTGCTGATCG AGCGCGACGA CAACCACGGA
TGGGCGCTGC CCGGCGGGCA CGTCGACCCC GGCGAGACCC CCACCGCCGC CGCGTTCCGT
GAGCTGACCG AGGAAACCGG ACTTGTCGCC AACCCCACCG ACCCGTGGGT TACGACGCTG
CCCGCCCGGG TCGTGCCCGA CCCCCGCGCA TCCGACGAGG CATGGATGGT CACCACGCCT
GTCCACGTCG ATCTCAGGCG CGGGTTCCGC ATCCTGCCGG ACGTGACCGG CGCCGACGAC
GCCCGCCGCG CCGTCTGGCT TCCCGCCGAC GACTACGACT GCCTGCTGAC CCACCTCGAC
GTGTTGCACG GCGGCCGGCT GTTCGCAGCC CACCGCGACC TGATCGCGGA CGCCCTCACT
CACTGA
 
Protein sequence
MNRTYTHPSV LNGIAAGASW ADPEMDPTRI DWTARRAVAA IPFPLVDGRP VNPAAPTGIR 
YGRNELGHWG EAQAADAIVT ATDSDGDRWL LLIERDDNHG WALPGGHVDP GETPTAAAFR
ELTEETGLVA NPTDPWVTTL PARVVPDPRA SDEAWMVTTP VHVDLRRGFR ILPDVTGADD
ARRAVWLPAD DYDCLLTHLD VLHGGRLFAA HRDLIADALT H