Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1203 |
Symbol | |
ID | 5703987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 1353436 |
End bp | 1354080 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641270721 |
Product | peptidase M23B |
Protein accession | YP_001536102 |
Protein GI | 159036849 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.609657 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGACCG GCGGACGGGC TGCGGAGGCT GCCACCATGG AGCCGTCACC AATTCTCGCC GTCCTGCTCG CCACCGCGCT GGTCGCCCCG CCTGCCACAC CCGCGTCACA CGTGCTGGTG TCCGCGCCGC CTACGGCTGT GTCCGTGCTG CCTGAGGCCG TGCTCGCGCC GCCCGAGGCC GTGCCTGGAC CGGGCGGCCC GCAGGGCGGT CTCGACCCTG TCCCGACCTT CCGGTGGCCG CTACCGGGGA CGCCGTCGAT CGCGCGGCGA TTCGATCCAC CGCCGCAGCC CTGGCTGTCC GGTCACCGTG GCGTTGACCT GGCTGCCGCA CCGGGTGTCC CGGTGTCGGC GGCGGGTGCT GGTGTGGTCA CCTTTGCCGG CACCGTCGCC GGTCGTCCGG TGGTCACCGT GGGGCACGCC GACGGCCTGC GGACCACGTA CGAGCCGGTG CTCTCCGGTG CCGAGGTCGG TAGCCCGGTG TCGGCCGGAG CGCTGATCGG TCACCTGCTG GGTGGGCACC GGGGATGTGC GGCCCCGGCA TGCCTGCACT GGGGCCTGCG TCGGGGCGAC ACCTACCTCG ACCCGTTGGC GCTGCTCGGT CGGGGGCCGG TGCGGCTCCT GCCACTCGAT GGTGAGCTCC GGTAG
|
Protein sequence | MATGGRAAEA ATMEPSPILA VLLATALVAP PATPASHVLV SAPPTAVSVL PEAVLAPPEA VPGPGGPQGG LDPVPTFRWP LPGTPSIARR FDPPPQPWLS GHRGVDLAAA PGVPVSAAGA GVVTFAGTVA GRPVVTVGHA DGLRTTYEPV LSGAEVGSPV SAGALIGHLL GGHRGCAAPA CLHWGLRRGD TYLDPLALLG RGPVRLLPLD GELR
|
| |