Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1201 |
Symbol | rnhB |
ID | 5703985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 1352146 |
End bp | 1352955 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641270719 |
Product | ribonuclease HII |
Protein accession | YP_001536100 |
Protein GI | 159036847 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0164] Ribonuclease HII |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.547748 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGACGC CACCGCGTAC CGTCGTCCGC CGTGACGGCG GGCTGTACGC GCTGGAACGC GCCCTGCAAC GACGGGGATT TCGGCACGTT GCCGGCGCCG ACGAGGCCGG CAGGGGTGCG TGCGCCGGTC CCCTGGTGGC CGCCGCCGCC GTCCTACCCG AAGGGCGACG CGGGGAGATC GACGGCCTCG CCGACTCCAA GTTGCTCACC CCAGCTAGCC GGGAGCGGGT GTACGCGGAG GTCGTCGCCC GGGCGTTGGC GTACGCGGTG GTGGTGATCC CGGCAGCGGA GGTGGACCTG CGCGGACTGC ACGTGTGCAA CCTGGCCGCG ATGCGGCGTG CGCTGGCGTC GCTGGCCACT GCACCTGAGT ACGTGCTCAC CGACGGCTTC GGGGTGGACG GCTTGGACGT GCCCGGGTTG GCCGTGTGGA AGGGCGATCG GGTGGCGGCC TGTGTGGCGG CTGCCAGCGT GCTGGCGAAG GTCACCCGGG ATCGGATCAT GGTCGAACTG GACACCACGT TTCCCGGTTA TGGGTTTGCG GAGCACAAGG GTTACATCAC CGCCGAGCAC TCGGCGGCGC TGCGGGAACG CGGGCCGTGC CCGGAGCATC GGTTCTCATA CGTCAATGTC GCTACCGTTT CCGGTCGGCG CGGGGCCCCG CCCCGGGCGC GTCGACCACT GGTCGTTGGG CTCGACGAGC CGATGGAACG CAGCGGGGCG GTAGAGGGTA CCGTCGGCGT GGCGTTGGGG GAGCGGCCCT GGGCTGCGGT GTCGGTGGGG AATGATGTGG CCATGGAAGG CGGGATGTGA
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Protein sequence | MLTPPRTVVR RDGGLYALER ALQRRGFRHV AGADEAGRGA CAGPLVAAAA VLPEGRRGEI DGLADSKLLT PASRERVYAE VVARALAYAV VVIPAAEVDL RGLHVCNLAA MRRALASLAT APEYVLTDGF GVDGLDVPGL AVWKGDRVAA CVAAASVLAK VTRDRIMVEL DTTFPGYGFA EHKGYITAEH SAALRERGPC PEHRFSYVNV ATVSGRRGAP PRARRPLVVG LDEPMERSGA VEGTVGVALG ERPWAAVSVG NDVAMEGGM
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