Gene Sare_1201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1201 
SymbolrnhB 
ID5703985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp1352146 
End bp1352955 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content71% 
IMG OID641270719 
Productribonuclease HII 
Protein accessionYP_001536100 
Protein GI159036847 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.547748 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGACGC CACCGCGTAC CGTCGTCCGC CGTGACGGCG GGCTGTACGC GCTGGAACGC 
GCCCTGCAAC GACGGGGATT TCGGCACGTT GCCGGCGCCG ACGAGGCCGG CAGGGGTGCG
TGCGCCGGTC CCCTGGTGGC CGCCGCCGCC GTCCTACCCG AAGGGCGACG CGGGGAGATC
GACGGCCTCG CCGACTCCAA GTTGCTCACC CCAGCTAGCC GGGAGCGGGT GTACGCGGAG
GTCGTCGCCC GGGCGTTGGC GTACGCGGTG GTGGTGATCC CGGCAGCGGA GGTGGACCTG
CGCGGACTGC ACGTGTGCAA CCTGGCCGCG ATGCGGCGTG CGCTGGCGTC GCTGGCCACT
GCACCTGAGT ACGTGCTCAC CGACGGCTTC GGGGTGGACG GCTTGGACGT GCCCGGGTTG
GCCGTGTGGA AGGGCGATCG GGTGGCGGCC TGTGTGGCGG CTGCCAGCGT GCTGGCGAAG
GTCACCCGGG ATCGGATCAT GGTCGAACTG GACACCACGT TTCCCGGTTA TGGGTTTGCG
GAGCACAAGG GTTACATCAC CGCCGAGCAC TCGGCGGCGC TGCGGGAACG CGGGCCGTGC
CCGGAGCATC GGTTCTCATA CGTCAATGTC GCTACCGTTT CCGGTCGGCG CGGGGCCCCG
CCCCGGGCGC GTCGACCACT GGTCGTTGGG CTCGACGAGC CGATGGAACG CAGCGGGGCG
GTAGAGGGTA CCGTCGGCGT GGCGTTGGGG GAGCGGCCCT GGGCTGCGGT GTCGGTGGGG
AATGATGTGG CCATGGAAGG CGGGATGTGA
 
Protein sequence
MLTPPRTVVR RDGGLYALER ALQRRGFRHV AGADEAGRGA CAGPLVAAAA VLPEGRRGEI 
DGLADSKLLT PASRERVYAE VVARALAYAV VVIPAAEVDL RGLHVCNLAA MRRALASLAT
APEYVLTDGF GVDGLDVPGL AVWKGDRVAA CVAAASVLAK VTRDRIMVEL DTTFPGYGFA
EHKGYITAEH SAALRERGPC PEHRFSYVNV ATVSGRRGAP PRARRPLVVG LDEPMERSGA
VEGTVGVALG ERPWAAVSVG NDVAMEGGM